Gene Sden_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0510 
Symbol 
ID4017109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp578546 
End bp579163 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID637954496 
ProductSel1 
Protein accessionYP_561525 
Protein GI91791874 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.209308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAC TATCACTGTT ATTATTGTGT TTATTGCAAT CTTCCGCGAT GGCAGAGTCA 
CTTGCCGTTG ATATTTATAG CAATGAACAA CTAATAAAGT TATTACGTGA TGGTACCTAT 
CTGCACCGTG TTAAGGCTGA TGAATGTCAG CTAGTGCAGG ATATAGAAGC CAGAGCCGAA 
GTATTACAGC AGCCCTTGTA TCAATTTTTG TGGGGCGAAA TGCTCAATCA AGGTGTCTGT 
GTTAAGCAAC ATGCCTCCCG CGGAATGGCA ATGTTGCGTA CAGCTGCTGA ACAGGGCAGC 
GCCGAAGCTA TGGTAAAATT GGCTGAATAC TATTACCAAG GTAAGTTGGT CATTAAAGAT 
AAAGAACGAG CGGTGCAATA CGCATTGCCG GCAGCAACCA ATGGCAGTAT CGCAGCACAA 
ATGATGCTGG TGAGACTGTT TAGTGAAGGT CACGGTAGCT CGAGAGATTA TCCATTGGCT 
TACCATTTAC TGTACAACAA TGTATTTGAA GACGAGGCAA CACAAAATAA AGCCTTGTCA 
TTATTGCGAG TTTTAGCTGC AAAAATGCCC ACCAGTGTTG TGGAAAGGGC GCAGCAAGCT 
CGCTTCTCCA CCCGTTAA
 
Protein sequence
MLRLSLLLLC LLQSSAMAES LAVDIYSNEQ LIKLLRDGTY LHRVKADECQ LVQDIEARAE 
VLQQPLYQFL WGEMLNQGVC VKQHASRGMA MLRTAAEQGS AEAMVKLAEY YYQGKLVIKD 
KERAVQYALP AATNGSIAAQ MMLVRLFSEG HGSSRDYPLA YHLLYNNVFE DEATQNKALS 
LLRVLAAKMP TSVVERAQQA RFSTR