Gene Sden_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0500 
Symbol 
ID4017790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp569656 
End bp569952 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content44% 
IMG OID637954486 
ProductSpoIIAA family protein 
Protein accessionYP_561515 
Protein GI91791864 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000649364 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAT TTACTCAGCA AGGTGATGCC TGCGCAATCC AAGGATCATT AGGTCAGCAA 
CAGGTGATTG AACTTTGGCC TAAAAGACGC AAATTGTTTA ATTCAGACAC TCAGGCCCTA
GACGTATCTG GGATAACCTA TGTGGACAGT GCGGGCGTTG CCTTGTTGCT TGAACTGGCA
CGTCTGTCCC ACAAAGGTTC ACCTAAACGT AAAATGCCAA GGATGCTCAC CAATCCTAGT
AAACACTTGA GTAAGATGAT TGAGCTTTAT GATTTAGAGG TATTTGTGCA GCCATAA
 
Protein sequence
MIEFTQQGDA CAIQGSLGQQ QVIELWPKRR KLFNSDTQAL DVSGITYVDS AGVALLLELA 
RLSHKGSPKR KMPRMLTNPS KHLSKMIELY DLEVFVQP