| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0454 |
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| Symbol | |
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| ID | 4017225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 525334 |
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| End bp | 526134 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954440 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_561469 |
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| Protein GI | 91791818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACGCT ATGTCGATAT TGCGGTAAAT TTATTGAGCC CAAGCTTAAT TGAACATGCC
GAAAACATAA TTAACGATGC GGAGAAGCTT AACGTCTCTC CGCTGATTGT TATTGGCAGT
GATTTAAGCG AAAGTTTAGC GGCCTATGAA CTGGCGCAGC AATATCCTAA CAAACTTTAC
ACCACCGCAG GTGTTCACCC TCATCAAGCA AGTGGTTGGG ATGAACACAG TCCCTTAACA
CTTAAGAAAT TAGCAGAACT TAACTCTGTA GTCGCCATAG GTGAATGTGG CCTAGATTAT
AATCGTGATT TCTCACCACG AGACATGCAA AGAGCCGCTT TCGAAGCTCA ACTAGTCTTA
GCTGCCGAGT TAAACATGCC AGTGCTAATG CATTGCCGTG AGGCATTTGA CGACTTCATT
CGCATTTTGA CGCCTTATCG TGCCGCCCTT CCCTATGCGG TATTACACTG CTTTACTGGT
AATGAAGATG ACTTAGCAAA ATGCCTAGCG CTTGATTTAC ACATAGGTAT TACGGGTTGG
GTGTGTGATG AAAGACGTGG GCTTGAATTG GCTAAATTAG TGCCGAGCAT TCCCGATGAC
CGCTTGCTGA TAGAGACTGA CAGTCCTTAT CTACTGCCAA GAAGCCTGCG ACCTAAGCCT
AAATCCAGTA AGAATTTACC CCAGTATTTA CCCTACATTT TAGATTACAT CGCAACGCTT
AGAGGCCAAG ACAGCGCTGA ACTGGCAAAA ACTTGCTACT TAAATAGCTG CACTGTGTTT
GGTTTGGAGC CTGCTGTATG A
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| Protein sequence | MSRYVDIAVN LLSPSLIEHA ENIINDAEKL NVSPLIVIGS DLSESLAAYE LAQQYPNKLY
TTAGVHPHQA SGWDEHSPLT LKKLAELNSV VAIGECGLDY NRDFSPRDMQ RAAFEAQLVL
AAELNMPVLM HCREAFDDFI RILTPYRAAL PYAVLHCFTG NEDDLAKCLA LDLHIGITGW
VCDERRGLEL AKLVPSIPDD RLLIETDSPY LLPRSLRPKP KSSKNLPQYL PYILDYIATL
RGQDSAELAK TCYLNSCTVF GLEPAV
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