| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0441 |
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| Symbol | |
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| ID | 4017975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 511721 |
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| End bp | 512440 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637954427 |
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| Product | cold-shock protein, DNA-binding |
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| Protein accession | YP_561456 |
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| Protein GI | 91791805 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00249195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATG GCACATTAGT GCGTTGGAAT GAAGGCAAAG GCTTTGGATT TATTCAGCCA
GAACAAAAAA TAACCTGCTT ATTAAATAAT AAACCGGATG AAGCGTTAAA TATTGATGTG
TTTATTCATA TCTCGACCCT CAAACACATG GCGCGCAAGC CTAAAGTCGG TGACAACATA
GAGTTTGAGC GCGAGCTGCA AGCCGATGGT AAAGTCAGAG CCCGTCGAGC TCATATTACT
GGGGTTGCCA TCCTAGCAAG CTCTCTTCAG GTCAATAGCC AAAGCCATTC AAAGGCTGCA
CTGAGTACAA ATAGCAGTGC TATCCATCAC AGCTCTCAGC ACAATTCTCT GCACAGCAAA
GACGCCTTTC ATCTCGTCAA AAGCGGCCGC GACACGGCAC CGAAGAACAA AATGGCTAGC
CATATTATTA CCACTTTATT GCTTATTAGC TTAGGGATTT ATGGGTTTAG TCAATCTAAC
AAAATCACCG CCAATGCCAG CGAGCCAGTG CCAACCCAAT TACAGTCAGA TGCAAATACG
CTTAGCCAAA ACACGGTGCA AAAACTTCAG CCCAATTTTT ATTGTGAAAC AGCTAAAACC
CATTGCAGCC ATATGAAATC CTGTGAGGAA GCCACTTTTT ATCTCAAAAA TTGCCCAACG
ACTCAAATGG ATGGCGATGG TGATGGTATC CCTTGTGAAC GCCAACATTG CGGTTATTAA
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| Protein sequence | MENGTLVRWN EGKGFGFIQP EQKITCLLNN KPDEALNIDV FIHISTLKHM ARKPKVGDNI
EFERELQADG KVRARRAHIT GVAILASSLQ VNSQSHSKAA LSTNSSAIHH SSQHNSLHSK
DAFHLVKSGR DTAPKNKMAS HIITTLLLIS LGIYGFSQSN KITANASEPV PTQLQSDANT
LSQNTVQKLQ PNFYCETAKT HCSHMKSCEE ATFYLKNCPT TQMDGDGDGI PCERQHCGY
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