| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0434 |
|---|
| Symbol | |
|---|
| ID | 4017968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 504695 |
|---|
| End bp | 505603 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637954420 |
|---|
| Product | TonB-like protein |
|---|
| Protein accession | YP_561449 |
|---|
| Protein GI | 91791798 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.480347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA TTATATATGT GTTTTTGTTA ATGTTTATTT TATTAGGATG TAAGTCAACG
ACGGTAGACT TAACAGTAAA GCCAGGTAAA TGTTACCAAA TTGAGTACAC AGCCAAACCC
CATTACACGC TCCAAGTGTC ACAAAAAACC GTTGCCGCAA TAAATCGATT TAATAATTGT
GATTTTGTTG AAGCGCAAAC CATATTGAAT ACGGCAATGC CAATGTTAGC TAATGATAAT
ATGCTAATAG CATCATACCA TGCACAAATG GGGGCCTATG ATATGATGAA AAACAGTCTA
GATAGAGGAA ATTATCAGCA GGTCATAAGT TCAAGTAAGG TATGGGCTAA TTTTGTAAAA
ATAGAGAATG ATCCCCGTAT TATCAAAGAG CTGTATATTG CCTATCGCAT GTTAAAAAAC
GAAGAGAAAA CAACACAATT AGCAGCTTTA GCCTTTGAAA CCCCTGATGC CGCAGAATCA
TACTTTTCTC TATGGCATCA AAAGAGTTTT CCTCAGCACT ATAAAAATAA AAAAATAAAC
ATAACATTGG CCTTGCTAGA TCTTATGCAT GAGCAACTGC AATCAATGAA TGAATTACCA
AGTTCAAGGT ATCCTGGAGA CACTGTAAAC ACTCGGTTAA ATCGCACTGA TTTGAGTAAA
CCTTTCTCTA TATACAAAGT TGCACCTGAA GCAATATCAC CAGGTTGGGT CATATTATCC
TTCTCTGTTA ACAAAAAAGG TAGAACTGAA GATATTAAAG TGATTGATGT AAGCCCAGTG
GGAGGGTTTG AAGCTGATGC CATTAATACG CTTTCAAAGT GGCTTTATTT ACCTGCTGAA
TCTGAAAATG GTAAGGCAAT TAAAACAGAA AACTTAAAGG TTAAACTTGA GGTAAATACT
CAAAATTAA
|
|---|
| Protein sequence | MINIIYVFLL MFILLGCKST TVDLTVKPGK CYQIEYTAKP HYTLQVSQKT VAAINRFNNC
DFVEAQTILN TAMPMLANDN MLIASYHAQM GAYDMMKNSL DRGNYQQVIS SSKVWANFVK
IENDPRIIKE LYIAYRMLKN EEKTTQLAAL AFETPDAAES YFSLWHQKSF PQHYKNKKIN
ITLALLDLMH EQLQSMNELP SSRYPGDTVN TRLNRTDLSK PFSIYKVAPE AISPGWVILS
FSVNKKGRTE DIKVIDVSPV GGFEADAINT LSKWLYLPAE SENGKAIKTE NLKVKLEVNT
QN
|
|---|
| |