| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0399 |
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| Symbol | |
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| ID | 4017145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 465493 |
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| End bp | 466359 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954383 |
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| Product | threonine dehydratase, biosynthetic |
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| Protein accession | YP_561416 |
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| Protein GI | 91791765 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCTAT CCCAGGTGGG GTTATTTGCC GATGGCGTGG CGGTCAAGCG CATTGGCGCT
GAGCCTTTTC GACTCGCCAA AGAATACGTC GATGAAGTGG TAACCGTAAG CTCAGATGAA
ATCTGCGCCG CCATCAAGGA TATTTTTGAA GACACCCGCG CTATTGCTGA GCCCGCTGGG
GCGCTAGCAT TGGCAGGGCT TAAGAAACAC CTTGGAAAAA CAGGCAAGGG CGAGAAAGTG
GCGGCTATTT TAAGTGGCGC TAATGTGAAT TTTCATAGCC TGCGTTATGT GTCTGAGCGC
TGCGAACTAG GCGAGCAAAA AGAGGCGATT CTTGCGGTCA AGGTCCCAGA AAAACCCGGC
AGTTTTCTGC GATTTTGCGA GCTATTAAAT AAGCGGGTGA TGACAGAGTT TAACTACCGC
TTTAGTGGTC GCGACCAAGC TATGGTGTTC GCCGGTATTC GCTTAAGCAA TGGCGCCGAG
GAGCTGGCTG AGATTATCAA AACCCTTGAG TCTCAAGGGT TTGAAGTGCA AGATTTATCA
CAAGATGAAA CCGCAAAACT GCACGTGCGT TACATGGTGG GCGGCAGACC GCCAAAACCT
CTGCAAGAGC GGTTATTTAG CTTCGAATTC CCTGAGCACC CAGGTGCCTT GCTCAAGTTT
TTAACCACAT TGCAAAGCCA ATGGAATATC AGCTTATTCC ACTATCGCAA CCACGGCGCC
GCCTTTGGAC GAGTATTAGC AGGTTTTGAA GTACCAGCCA GTGATGCCTT GCCCTTTGCG
CGCTTTTTAA CTGAGCTTGG TTTTGTCTAT CAAGAAGAAA CCCACAGCCC AGCGTACCAG
TTATTTTTGA ATACCCCGGC GGTGTAA
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| Protein sequence | MTLSQVGLFA DGVAVKRIGA EPFRLAKEYV DEVVTVSSDE ICAAIKDIFE DTRAIAEPAG
ALALAGLKKH LGKTGKGEKV AAILSGANVN FHSLRYVSER CELGEQKEAI LAVKVPEKPG
SFLRFCELLN KRVMTEFNYR FSGRDQAMVF AGIRLSNGAE ELAEIIKTLE SQGFEVQDLS
QDETAKLHVR YMVGGRPPKP LQERLFSFEF PEHPGALLKF LTTLQSQWNI SLFHYRNHGA
AFGRVLAGFE VPASDALPFA RFLTELGFVY QEETHSPAYQ LFLNTPAV
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