| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0397 |
|---|
| Symbol | |
|---|
| ID | 4017143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 464657 |
|---|
| End bp | 465145 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637954381 |
|---|
| Product | kelch repeat-containing protein |
|---|
| Protein accession | YP_561414 |
|---|
| Protein GI | 91791763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTATA TCGCGCCACT TTCTGGCAGG CTTGCCTCTG TCGCTATTGG CATAAAAGAC
AGTGCTTATA TTTTTGGCGG CTATACCGTG GCTGAAGATC ATCAAGAGCT CAGCACCGCA
GACAATTACC GCTTTAACAT TCAAGATTTA CGCTATCAGC GCATTGCCGA TATGCCCGTC
GCCGTGGACG ACAGTGCGGT GGCAAGCTAC CAAGACAGGT ACATCTATCT CTTTGGTGGC
TGGCATCAAG ATGGAAACGT CAATTTAGAG CAAGTGTATG ACACCCATAC CGATACTTGG
TCGCAAGCCA GCCCTATTCC AGCCCCTGCA GTATTTGGTC AGGCTGTCTG CATGTTTGCA
AATCAGCTGG TGCTGTGTGA TGGCGTTAAA ATTAAAGCCA ATCTCAGGCA GAAGCGCAGC
TACCAGGCAT CACCTGTGTG TCTTTTTGGT GAAATATCCC CAGATAACCA CCAGAGGATC
GCTTGGTAG
|
|---|
| Protein sequence | MPYIAPLSGR LASVAIGIKD SAYIFGGYTV AEDHQELSTA DNYRFNIQDL RYQRIADMPV
AVDDSAVASY QDRYIYLFGG WHQDGNVNLE QVYDTHTDTW SQASPIPAPA VFGQAVCMFA
NQLVLCDGVK IKANLRQKRS YQASPVCLFG EISPDNHQRI AW
|
|---|
| |