| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0369 |
|---|
| Symbol | |
|---|
| ID | 4016695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 420173 |
|---|
| End bp | 421483 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637954354 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_561387 |
|---|
| Protein GI | 91791736 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCTA GTGTCGATGG TGGGGAATCG TTTGATCTGG TCATCATAGG TGGCGGCATC
ACAGGTGTCG CCATAGCTCA ATTTGCTCGG GCAGCCGGTT ACAGTGTCTG CCTGCTGGAG
CAAGCAGAGA TAGGCGCTCA GACTTCTGCC AACTCAAGTA AGCTCATTCA TGGTGGGCTG
CGCTATTTAG AATCCGGACA ATTAGGCCTA GTTTACAAAT CCTTAGCCAA TAGGCGCACG
CTACTCTCGC TCGCCCCTAA TCTTGTCAAA CCCATACCCT TCACCATACC TGTGTACCAA
GACAGCCAGC GGCCTCCTTG GCTAATCCGT TTAGGATTGA GCCTGTATTG GCTGCTCAGT
GGTTTCTCTG AGTTAGGCCG CTTCCGTACC ATTCCACCAT CGCAATGGGC TAATCTTGGC
GGGATAAAAC AGCAAGGGCT TAAGGCCGTA TTCCAGTATT GGGATGCACA AACCCATGAC
AAAAAGCTCA CTCAAGCCGT TGCCAGCAGC GCTATAACGT TGGGCGCTAA ACTTCTCACC
CAGGCCAAAT GTACCCAGTT AACCCATCAG GGTATGGATG CCCCCCAAGG TTGTCATTGG
TTAGTGCGCT ATCAGTTAAA GCCTGAGCAA TTAAAACAGG CTCAGCGACA TAAGAGTCAG
TTGCAAGCAG ACGGCCAGGA TTACTCAGAG AAACAGTACA CACTGGCTGC CCGTATGGTG
ATTAATGCTG CAGGTCCTTG GGTCAATGAG GTGCTATCAT CTCAGTCAAC AACAAATAGC
CTCACGCCGC TCGCCATAGA TTGGGTTCAG GGCAGCCACC TAGTTCTGGA CATTCCTGCG
CCCGAAGGGA TTTTTTATTT GGAATCACAT CTGGATAAAC GGGTGATTTT TGTTATGCCC
TGGGAGGGCA ACACCTTAGT TGGCACCACA GAAACCTTGC GATCCTCTTT GCAGACACCC
ATAACGCCAC AAGCCGATGA AATTGATTAT CTATTGCAAA TTTATCAGCA TTATTTTCCT
AAACGCCATA GCCTCGAGCA GCTCAACAGT TTAATTATTG GTCATTTTTG TGGCGTTAGG
GTCTTACCTA AGGCGAAAGG AAAACTCTTT AATCGCTCAC GAGACACCCT CATTGTGCCA
GGAACCTTAG GGGTGGACGG CTTTGAACCA AGATTACTGA GTATCTATGG CGGCAAACTC
ACCACCTTTA GGGATACGGC CAAGCAAGTG CTGGCCGACA TACGCAAACA ACTGGGTAGC
AGAGACGTCA TCGCCGATGT GGACGCCATC TCTTTAGGCG ATGAGCCTTA A
|
|---|
| Protein sequence | MGSSVDGGES FDLVIIGGGI TGVAIAQFAR AAGYSVCLLE QAEIGAQTSA NSSKLIHGGL
RYLESGQLGL VYKSLANRRT LLSLAPNLVK PIPFTIPVYQ DSQRPPWLIR LGLSLYWLLS
GFSELGRFRT IPPSQWANLG GIKQQGLKAV FQYWDAQTHD KKLTQAVASS AITLGAKLLT
QAKCTQLTHQ GMDAPQGCHW LVRYQLKPEQ LKQAQRHKSQ LQADGQDYSE KQYTLAARMV
INAAGPWVNE VLSSQSTTNS LTPLAIDWVQ GSHLVLDIPA PEGIFYLESH LDKRVIFVMP
WEGNTLVGTT ETLRSSLQTP ITPQADEIDY LLQIYQHYFP KRHSLEQLNS LIIGHFCGVR
VLPKAKGKLF NRSRDTLIVP GTLGVDGFEP RLLSIYGGKL TTFRDTAKQV LADIRKQLGS
RDVIADVDAI SLGDEP
|
|---|
| |