| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0339 |
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| Symbol | |
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| ID | 4020355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 378604 |
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| End bp | 379833 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637954320 |
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| Product | signal transduction protein |
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| Protein accession | YP_561357 |
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| Protein GI | 91791706 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0012225 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTT ACACGGCAAG ACAACCTATT TTGAACCGAA GGCAGCGGGT TGTTGCTTAT
GAATTATTAT TTAGAGACAG TTATAAGAAC TGTTTCCCTG TGGATGTGCC TGACAAGGTG
GCTACGGCTA AATTATTGGT CAATAGCTTT TTGAGCATGG ATATTGAGGA TATGACAGAT
GGCAAGCCTG CCTTAATTAA TTTCCCTACT AGCCTATTGA AAGAGCATTT AGTTCATATC
TTGCCATATA AGAATTTAGT GATTGAAGTG CTAGAAACTG TGGAACCAAA CGATGATAAT
TTTGCGATTT TAAAGCAATT ATTTGATTCA GGTTACCATC TTGCCTTGGA TGATTTTATT
TACAGCCCAG CTTGGGATAG ATTCTTACCC CTTTTTAAAC TAATAAAAAT TGATATTGTT
GCCACTCCTT TGGACACTAT TGCGCATATA TTGCCAAAGT TGAAACAGAA AAAGACCCGC
TTGCTTGCAG AGAAAGTGGA GACACAAGCG GACTTTTTAC ACGCTAAAGC CCTAGGTTTC
GATTATTTTC AAGGTTATTT CTTTTATAAA CCTGAAATTG TTAAAGGCAA TGAAGTCGAG
CTGTCTCAGC CGTTTTTAAT GTCGATTTAC ACGGAAGTGA TGAAGCCTAG TTTTAGTTAT
CGAAAATTGG AAGCTTATTT TACTCAAGAT ATGGATTTGA GCTATAAGCT ATTACGTTTT
GTAAATTCGA GTTATTTTTC CCATGTGAAA GATATTATCT CTTTAAAGCA AGCGATGATT
TTTCTAGGAG AAAATCAATT ACGCAAATTT GTCTGTCTTA TTGTGATGGC GCAGCTTAAT
CCCGATAAAC CCCAAATCTT GATCCAAAAT ACTATGTTAA GGGCTAGATT GTGTGAAGTT
ATCGCCAAGG TGATGAAGTT GAATAAACTG GCGGATGCCG CGTTTTTAAC CGGACTATTC
TCAACCTTGG ATGCCATTCT AGATAAACCC ATGGAAAAGG TGTTGCACTC GCTGCCATTA
GCGCCAGAAA TCAATAATGC CTTATTGCAT CAACAGGGTG AGCTGGCTGA ATGTTTAGCC
TTGGCCATCG CCTATATGCA AGGGAATTGG GAATTCGTGT CTGAGTTCGT GAGTCGTAAT
CACATTAACG CCGGTGAGTT AACCCGCCGA TGTAACCAAG TCTATCTGTG GTTGTCCGAA
TATCAGCGTT CATCTTCATC AAAAGCTTAA
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| Protein sequence | MHFYTARQPI LNRRQRVVAY ELLFRDSYKN CFPVDVPDKV ATAKLLVNSF LSMDIEDMTD
GKPALINFPT SLLKEHLVHI LPYKNLVIEV LETVEPNDDN FAILKQLFDS GYHLALDDFI
YSPAWDRFLP LFKLIKIDIV ATPLDTIAHI LPKLKQKKTR LLAEKVETQA DFLHAKALGF
DYFQGYFFYK PEIVKGNEVE LSQPFLMSIY TEVMKPSFSY RKLEAYFTQD MDLSYKLLRF
VNSSYFSHVK DIISLKQAMI FLGENQLRKF VCLIVMAQLN PDKPQILIQN TMLRARLCEV
IAKVMKLNKL ADAAFLTGLF STLDAILDKP MEKVLHSLPL APEINNALLH QQGELAECLA
LAIAYMQGNW EFVSEFVSRN HINAGELTRR CNQVYLWLSE YQRSSSSKA
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