Gene Sden_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0312 
Symbol 
ID4020425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp352296 
End bp352925 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID637954293 
Productphage integrase 
Protein accessionYP_561330 
Protein GI91791679 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGAG TGCATTCAGC TAGGGATCGT GACGAATTTG GAGTAATTCT TGATGCGTTG 
GAACGAAATC ACGGACTTAA AGCCCGCTGG CTGGCAGAGT TAACCGCACT ATGGGCATTA 
AGGATCAGCG ATTTACTCGC AATTACAACC GCTCAAGTTG ATGAGTCTTT TAATACTGGT 
GAATTCACCA TTATCGAGAC CAAGACTCAA AAAAATAAAG TGATCACCTT AACCCCTCAT 
GCCATTAAAT TACTTAATAA AATGAGACTG ACATTCCCAA ACAACATATA TCTGTTTGAA 
AGCCGTCATG GAGGTTCGAG AAAACCATTA AGTCGTAAGA CAGCTTGGCG TTGGATGTCA 
CAAGTAGAAC CTGACGTAAT CAAGTGGCGG CGTACCTGTG GCCGCTTAGG GGGCGTTAAT 
CTCGGTACTC ACTCTTTGCG TAAGTCAGGC TCACGATTAC GACAGCAAGC AGGTGTGACT 
TTAGAGGAAT TACAGCAATT ACTTAACCAT AGTAAGCCAG AAACAACCAT CAACTATCTG 
GACAATAACG AACAAGACTT AGTCGATACC TTTGTCGCAG GAGATATAGC GCTATTTGGT 
GAGGGGATCT TAGATCAAAA GAACAATTGA
 
Protein sequence
MSRVHSARDR DEFGVILDAL ERNHGLKARW LAELTALWAL RISDLLAITT AQVDESFNTG 
EFTIIETKTQ KNKVITLTPH AIKLLNKMRL TFPNNIYLFE SRHGGSRKPL SRKTAWRWMS 
QVEPDVIKWR RTCGRLGGVN LGTHSLRKSG SRLRQQAGVT LEELQQLLNH SKPETTINYL 
DNNEQDLVDT FVAGDIALFG EGILDQKNN