Gene Sden_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0219 
Symbol 
ID4017939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp239052 
End bp239615 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID637954195 
Productheme oxygenase 
Protein accessionYP_561239 
Protein GI91791588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3230] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAG ACTATCTAAA ACAACATACC CGCGCGTTAC ATGTTCAACT AGATAACCTC 
CCATTGTTGG TTGCGCTGGC GAGTCGTCAG TTAGACCGCG AACAGTACCA CCAATGCCTT 
AGTTGTTTTT ATCAGGCTTA TTCGGTGATA GAAACGACAT TAATTTCTAG TCCGCAGAAC 
AAACAACCGG CCTTAGCTTA CCAGGCACGC CTTTCCAATT TACGTCATGA GCTCATGCAA 
TTAGGCATGC CTATACCTGG TAGTCATGAT GTCCCCCAAC TGCAAATTTC CACAGCCGCT 
CACTATTGGG GTGCGCGTTA TGTGCTGGAG GGCAGTGCTT TGGGCGCAAA GTTTTTATTA 
CCTAAAATTC AACTAAGTCT TGAGCTTAGC TCACCGGAGA CATTAATTTT TTTTAGCCAG 
TTATCCCAAT TAGCAAACTC TTGGCCTGAG GTAATAACCC ACATTAATCA GATAATTATT 
CTAGATAACC AAAAGAAAGA AGCGTTGGCC GCAGCCAAGA AGACTTTTGA GATTTTTCAT 
TCACATTTTT CGATTAAGGA GTGA
 
Protein sequence
MATDYLKQHT RALHVQLDNL PLLVALASRQ LDREQYHQCL SCFYQAYSVI ETTLISSPQN 
KQPALAYQAR LSNLRHELMQ LGMPIPGSHD VPQLQISTAA HYWGARYVLE GSALGAKFLL 
PKIQLSLELS SPETLIFFSQ LSQLANSWPE VITHINQIII LDNQKKEALA AAKKTFEIFH 
SHFSIKE