| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0129 |
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| Symbol | |
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| ID | 4017213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 139544 |
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| End bp | 140746 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954102 |
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| Product | general secretion pathway L |
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| Protein accession | YP_561149 |
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| Protein GI | 91791498 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAAC GCTTATTTAT TCGATTAGGA TCCCATCAGG AGCAAGCTTG CTCTTGGTTG
GTGTGGTCGG AACAAGAACA AGAGATTATC GCCTCAGGTG AGTTGAGTGA TGCGGCCAGT
TTAGCGAGCC TCAAAGACAG AGTCGGCAAT CGGCCTGTGG ATATCTTAGT GCCGACGTCC
AGCATGATGT TAACCGACAT CAATCTGCCA GAAAAAGGCC AGCGTCAAGC CTTAAGGGCA
CTGCCTTTCC TGATGGAAGA ATCCTTAGCC ACAAGTATCG AAGATATGCA TTTTGTGGTG
GGTCCTCGCA CTGGTGAAAA GCTCAGTGTA ATAGCCGTGG CCCATCAGCA GATGCAAGAC
TGGCTAACCT GGCTTAGCGA CGCTGGCCTT AAAGCCAAGC GTCTAGTGCC CGATTGCTTG
GCGCTTCCCT TAGATGAGTG CCAATGGGCC GCCATACGTT GTGGTGATGA GTTGGTGATT
CGCACAGGTC AAGGCACTGG GGTGAGCTTG CCAGAGGCTT GGCAATCTTT TGCCTTGCCT
AAGTTAATGG CATCGACCCC GACGGGGGAT GAAAGCATTA ATGTCGCCAG CTACAGTCAA
GAACTTGCGT TTGCCAGTGC CAATATAGAG CACAAGCCCT TAGAGCTGCC CATGCTAGTG
TTTGCTAAGG GCATACTCAA TGCACCGGTT AACTTACTCA GTGGTGTCTA TAAGCCGAAG
CGTGAATACA GTAAGCAGCT GTTATTGTGG AAAAATAGCG CCATTATTTG TGTGCTTGCC
ATAGTGCTTG CCTTAGTGAA TAAAGGCTTA GATATTCGCC AGCTCAATCA AGCCACCATG
GAGCTGAACC AACAGAGCGA GAGTATCTTT AAGAGCGTCA GCCCCAGCAC CCAAAGAGTG
GTTAACATAC ACTCGCAAAT GGGCGCCATG CTAAAAAGCA TGCAGGGCCA GGGCGGCGGC
GTGGCATTTT TTGAAATGCT CAGCGGCCTG CAGACGGCCT TTAAACAGAT CCCCGATCTG
AAACCCAATA GCTTAAGGTT TGATGCTAAT CGCAATGAGA TAAGAATGCA GATCACAGCT
AACTCCTACG GCCAAATCGA GCAGTTTAAA GACCTGGTCA GTAAAGATTT TGAAATAGAC
ACAGGTGCCA TGAATAGCAA CGAAGACAAG GTGACGAGCA CTGTGACTGT GAGGAGCAAA
TAA
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| Protein sequence | MSERLFIRLG SHQEQACSWL VWSEQEQEII ASGELSDAAS LASLKDRVGN RPVDILVPTS
SMMLTDINLP EKGQRQALRA LPFLMEESLA TSIEDMHFVV GPRTGEKLSV IAVAHQQMQD
WLTWLSDAGL KAKRLVPDCL ALPLDECQWA AIRCGDELVI RTGQGTGVSL PEAWQSFALP
KLMASTPTGD ESINVASYSQ ELAFASANIE HKPLELPMLV FAKGILNAPV NLLSGVYKPK
REYSKQLLLW KNSAIICVLA IVLALVNKGL DIRQLNQATM ELNQQSESIF KSVSPSTQRV
VNIHSQMGAM LKSMQGQGGG VAFFEMLSGL QTAFKQIPDL KPNSLRFDAN RNEIRMQITA
NSYGQIEQFK DLVSKDFEID TGAMNSNEDK VTSTVTVRSK
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