| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0127 |
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| Symbol | |
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| ID | 4017211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 137655 |
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| End bp | 138410 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954100 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_561147 |
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| Protein GI | 91791496 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACATCA AAAGTAACTT AGGCAGCCGC GGCTTTACCT TATTAGAAAT GCTCATTGCG
GTGGCGATTT TTGCCATGCT AGGGGTTGCG GCCAACAGCG TGCTGTCCAC TGTAATGCGT
AACGATGAAG TCACCGCAGA TTTTGCTAAG CGACTTAAAT CCTTGCAACA AGGTTTTGGC
GCCATAGAGC GGGACTTGGG ACAGATTGTG GCCCGCACAC CAAGGCTACT GGATGGGAGT
CGTGCCACCG CAGTGTTTCA ATATGGCAGC GATATTTTAG ATTCTGAATC AGAGTCGTTA
GTTTTTTACC GCCTAGGTTG GCTTAATCCC GCCGGCATCT TGCCACGGGG CACGCTGCAG
TCTGTGGCTT ATGTGGTGCA AGAAGGGCGC TTGGAGCGCT GGTATCATCC TTATCCAGAG
CCTGACAGTG GCGCCGAGCC ACTAAAAAGC GTGATTATCG ATAATGTCTT GTCGGTGGAA
TACGCGTTTT TCAGCAGCGA CAAATGGCAG AAACAAGTGG CGAACACCCA ACTGCCAGAA
GGTATCGCCA TTAAGGTGGA AGTGGAGGGT CTAGGCTTTA TCGAACGTAA GTTTTTATTG
CCTAAGGGCG CAGCAGTTGT AGACAGTGCT TCGGGTTCGC CAAATGATCC GAACGACCCT
AAAAATCCAG ATAACGGACA AGACATTAAG CCGGGCGATG GAGATGGTCG AGACAAACGC
GATGATGGTG ATGAAGATCA AAGGAAGCGT GATTAA
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| Protein sequence | MYIKSNLGSR GFTLLEMLIA VAIFAMLGVA ANSVLSTVMR NDEVTADFAK RLKSLQQGFG
AIERDLGQIV ARTPRLLDGS RATAVFQYGS DILDSESESL VFYRLGWLNP AGILPRGTLQ
SVAYVVQEGR LERWYHPYPE PDSGAEPLKS VIIDNVLSVE YAFFSSDKWQ KQVANTQLPE
GIAIKVEVEG LGFIERKFLL PKGAAVVDSA SGSPNDPNDP KNPDNGQDIK PGDGDGRDKR
DDGDEDQRKR D
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