| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0107 |
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| Symbol | |
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| ID | 4017171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 118567 |
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| End bp | 119694 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954080 |
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| Product | ABC transporter related |
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| Protein accession | YP_561127 |
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| Protein GI | 91791476 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00134117 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA ACCCTGATGA ATTTCGTTGC CAGATAAGTC AACAGACTCC TATTCCCTTG
CAATTGGACT TTAGCTGCCA AGGTGGAGAG ATCCTCGCCA TAGTAGGGCC ATCGGGTGGC
GGTAAGACCA GCTTACTGCG CATGCTGGCG GGTTTGAGTC AACCGCAAGA GGGGGAGATT
AGCTTAGGTG AGGAAGTGTG GTTTGATAGT GAAAAGCACT TATGTTTATC ACCCCAGCAG
CGTCATATCG GCTATGTACC ACAGCATTTT GGCTTATTTC CGCGCTTAAC AGCGTTAGAG
AATGTGCTGG CCGGGTTAGA TCATTTACCC AAGTCCCAGC GGCGAGAACA CGGCCTAACT
TGGTTACAGC GGGTTGGCTT AGGCGACTAT GGCCACAGAT TACCTAGGCA GCTTTCTGGT
GGTCAAAAAC AGCGGGTTGC CCTTGCTCGG GCGTTGAGCC GTGAGCCTAA GGTCTTGTTG
CTGGATGAGC CTTTCTCGGC CCTAGACGTG CAAACCCGCG ATGGTTTATA TCAACATCTT
ATTCAACTTA TCGATGAACT CGCCATTCCC ATCATCTTAG TGACTCATGA TATTCAAGAG
GCATTTTTAT TGGCGGATAA GATGCTACTA CTGCACCAAG GGAAAATGCT CCAAAGCGGC
GCTCCCGCTG AAATTTGGGC AAAGCCAGTG AATGAGCTGG TGGCGCGGCA GATGGGGCAT
AAGAATATTT TGCCTGTAGA GTGTATCGGT CTCACTCAGT CAGACGCCGA GTTTAGTCTA
GCGGGACAAA CTCTGCGGCT GCCATCGGCT ACCGGGATTG AACTTGGTAC CCAATTCGGC
TGTATTTTTA ATCAAGCAAG TCTTAGGCTT ATGCCCTTAG AGGTTAATCA ACTGGGGGAT
ACAGCCGAAC ATTGGCTATG GGTTAGGGTC ATTCAGGTTC GCGTTATTGC TGGCGCCGTG
CGGGTTGAAC TCATGCTTGA ACAGAGTGAA TGCATGCTTG AACTCATACT TGAGCCGGGC
TTAAATCTTG AGTTTGGCTT GCCGGGGTCT AGATTATTGA ATATACAGCC AAACCAGCGA
AGACAGTTAG CCGTCGACCC TTGGAGGCTT ATTCTCATCC CTTCATGA
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| Protein sequence | MANNPDEFRC QISQQTPIPL QLDFSCQGGE ILAIVGPSGG GKTSLLRMLA GLSQPQEGEI
SLGEEVWFDS EKHLCLSPQQ RHIGYVPQHF GLFPRLTALE NVLAGLDHLP KSQRREHGLT
WLQRVGLGDY GHRLPRQLSG GQKQRVALAR ALSREPKVLL LDEPFSALDV QTRDGLYQHL
IQLIDELAIP IILVTHDIQE AFLLADKMLL LHQGKMLQSG APAEIWAKPV NELVARQMGH
KNILPVECIG LTQSDAEFSL AGQTLRLPSA TGIELGTQFG CIFNQASLRL MPLEVNQLGD
TAEHWLWVRV IQVRVIAGAV RVELMLEQSE CMLELILEPG LNLEFGLPGS RLLNIQPNQR
RQLAVDPWRL ILIPS
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