| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0011 |
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| Symbol | |
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| ID | 4017803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 15084 |
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| End bp | 18281 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637953981 |
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| Product | amidohydrolase |
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| Protein accession | YP_561031 |
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| Protein GI | 91791380 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000114616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATGT TATCAATCAA ATTTACCCCA CTATATACGG CCATCGCATT AACACTTGGA
TGCTCATCAT TAGTATATGC AGAAGATGAG GCACCGAAAT GGCAAGTTAA TGCCCCAGAA
CACGCACCAT TAGAAAAGGC CTCCATTGAT GTCAATGAAG GTACTTGGAT GAATGTGAGT
GTGTCTCCCG ATGGAGAACA TATAGTATTC GACCTACTCG GTGATATATA CCAGATGCCG
ATTTCTGGAG GAGATGCCAA ACCATTAGCC AAAGGTATCG CTTGGCAGAT GCAACCTGTG
TATAGCCCAG ATGGTAAATA TATTGCTTTC ACCTCAGATG AAGATGGCGG TGACAATATT
TGGGTAATGA ATGCCGATGG TAGCAACCCA CATCCAGTGA CCAAGGAAAC ATTCCGCTTA
CTAAACAGTC CTGCATGGAG CCCAGACTCA CAGTACTTAG TCGCTCGTAA ACACTTCACC
GCTAGCCGTA GTTTAGGCGC TGGTGAGGTC TGGTTGTACC ATGTGGCTGG TGGTGAAGGC
GTTAAACTTA CCGAACGTCC TAACGATCAA AAAGATTTAG GTGAACCCGC ATACTCACCG
GATGGTCGCT ATATTTACTT TAGCCAAGAC GACACTCCAG GAAAAACCTT CCATTATTCA
AAAGATTCCG TCAGTGGTAT TTACAAGATT AAACGCTACG ACACTCAAAC GGGTGATATT
GAAATTTTAG TTGAAGGTAC AGGTGGTGCC ATTAGACCCA CACCTAGCCC TGATGGTAAA
AAACTGGCTT ATATCAAACG TGATGGTTTC CAATCCTCTC TCTATTTACT GGATTTGCAA
TCTGGTGAAA CCAACAAACT GTATGCTGAA CTCGACAGAG ACATGCAAGA AACGTGGGCC
ATTCATGGTG TGTATCCAAG CATGGCTTGG ACTCAAGATA ATAGCAGCAT TGTCTTCTGG
GCCAAGGGTA AGATTAATAA ACTCAAGCTT AAAGACTTAT CGGTCAGCGA TATTCCTTTT
AAGGTCAAGG CGCAATTAGA TATTCAGCCA TCGGTGCGTT TCACACAAAA CTTAGACCAA
GACAAGTTTG ATGTAAAAAT GCTGCGTATG GCACAAGTAT CACCAGATGG TAAGAAGGTG
GTATTCGAAG CTCTAGGTAA GTTGTGGATC CGTGACATAG AAAATGACAC TCAAGAACGT
TTGACTCGAC TCGATGATGA TATCAACGAG CTATTCCCCC AGTGGTCACG TGATGGCAAG
CAAATAGTGT TCACCACTTG GAATGATCAA GACCAAGGTA CAGTCAGCCT GATAAGCGCC
CGTGGTGGCA AAGCGACAAG GTTAACTAGC GAACCAGGTA AATATGTTGA ACCAACGTTT
GCTCCCAATG GTCAGTTTGT TGTGTACCGC AAGGCCAATG GCGGCAACAT CACACCGAGA
ACTTGGTCTC AGGAAACTGG ACTGTACAAG GTCGATGTCA AGGGTAAGCA GAATACTAAA
ATTACAGCTG AAGGTTATCA AGCACAGTTT GGTGCAGATA CAGACCGAAT CTTCTTTATG
GAGCAAGGTG AAACGCCGCA GCTGTCTTCA ATTCGAATCG ATGGCTTTGA CAAACGGGTG
CATTACACCA GTGAGCATGC CACTGAATTT AGGGTTTCTC CCGATGGCGA ACACTTGGCC
TTTGCTGAAC GCTTCCGTGT CTATGTCACT CCCTTTGCTA AACACGGTGA AACCATAGCC
ATAGGCCCTA AAGCCAGTAA CCTTCCTGTG ATCCAACTGA GCACCAGAGC AGGTGAAAGT
ATTAGTTGGG GCAATAACAG TGACAATCTA TATTGGACAC TGGGCCCTGA ACTTTACCAA
GCCAAAGTTG ATACCCAATA CGGCAAGAAA GATGATAAAA GTCAAGCAAA AATCACCAAC
ATTGGCTTTA AACAAGATGC CTATGTTCCA CGTGGAACCA TAGCCTTCGT CGGTGGCACT
GTTATTACTA TGGAAGAAGA TAAAGTCATA GATAAAGGCG TTGTCATCAT CAAAGATAAT
AAAATTATTG CTGTCGGTGA TGCTGCTACA AAAATACCTA ATGGCGCTCA AGTGATAGAC
ATCGCTGGTA AGAGTATCAT GCCAGGTTTA TTCGATGCCC ATGCTCACGG TCCTCAGGCG
GATGAAGAGA TTATTCCACA GCAAAACTGG ACCTTATACT CGGGCCTCTC TCTTGGGGTT
ACCGCTATTC ATGACCCATC AAATGACACC ACTGAAATCT TTGCCGCTTC AGAACAGCAG
AAAGCCGGTA GCATAGTTGG GCCACGCATC TTCTCTACTG GAACCATACT CTACGGGGCC
AATGCGCCAG GTTACACCTC CCACGTCGAC TCCCTTGATG ATGCAAAATT TCATTTAGAA
CGCTTGAAAA AAGTCGGCGC GTTTAGCGTT AAAAGCTATA ACCAGCCACG ACGTAATCAA
CGCCAACAAG TGATTGCCGC AGCCCGTGAG TTAGAAATGA TGGTAGTGCC GGAAGGTGGA
AGTTTGCTTC AGCATAACTT ATCTATGGTG GTCGATGGTC ACACTACCCT AGAGCATTCA
TTACCTGTTG GGGCTATCTA TTCTGATATC AAACAATTAT GGAGCCAGAC TAAGGTGAGT
TATACCCCCA CCTTAGTGGT CGCCTATGGC GGTATCTCAG GGGAAAACTA TTGGTACGAT
AAGACGGATG TCTGGGCACA TCCAAGACTA TCTGCTTATG TACCCGCCGA TATTCTCCAA
GCCCGCTCTA TGCGTAGACC CACAGCACCA GATGGCCACT ACAATCATTT CAATGTCGCC
AAAGTTGCTA AGGCACTAAA TGATGTTGGC GTTAAGGCAA ATATAGGTGC TCATGGTCAG
CGTGAAGGTT TAGCTGCCCA TTGGGAAATG TGGATGTTCG CTCAAGGTGG CATGAGTAAT
CAAGAAGTGC TTAAGACTTC TACCATCAAC CCAGCCACTA CTTTTGGCAT GGACCATCAA
CTCGGCTCGA TTAAAACTGG TAAGCTTGCA GATCTGATTG TTATCGATGG CAATCCATTA
GAGGATATTC GAGTGACTGA TAAAGTTGTC TATACCATGA CCAATGGCCG TTTATTCAAT
GCCGAGACCA TGAATGAACT GAATGGTGAC AAGCATCAAC GTAATCCCTT CTTCTTTGAA
AAGGCAAATA AACAATAA
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| Protein sequence | MLMLSIKFTP LYTAIALTLG CSSLVYAEDE APKWQVNAPE HAPLEKASID VNEGTWMNVS
VSPDGEHIVF DLLGDIYQMP ISGGDAKPLA KGIAWQMQPV YSPDGKYIAF TSDEDGGDNI
WVMNADGSNP HPVTKETFRL LNSPAWSPDS QYLVARKHFT ASRSLGAGEV WLYHVAGGEG
VKLTERPNDQ KDLGEPAYSP DGRYIYFSQD DTPGKTFHYS KDSVSGIYKI KRYDTQTGDI
EILVEGTGGA IRPTPSPDGK KLAYIKRDGF QSSLYLLDLQ SGETNKLYAE LDRDMQETWA
IHGVYPSMAW TQDNSSIVFW AKGKINKLKL KDLSVSDIPF KVKAQLDIQP SVRFTQNLDQ
DKFDVKMLRM AQVSPDGKKV VFEALGKLWI RDIENDTQER LTRLDDDINE LFPQWSRDGK
QIVFTTWNDQ DQGTVSLISA RGGKATRLTS EPGKYVEPTF APNGQFVVYR KANGGNITPR
TWSQETGLYK VDVKGKQNTK ITAEGYQAQF GADTDRIFFM EQGETPQLSS IRIDGFDKRV
HYTSEHATEF RVSPDGEHLA FAERFRVYVT PFAKHGETIA IGPKASNLPV IQLSTRAGES
ISWGNNSDNL YWTLGPELYQ AKVDTQYGKK DDKSQAKITN IGFKQDAYVP RGTIAFVGGT
VITMEEDKVI DKGVVIIKDN KIIAVGDAAT KIPNGAQVID IAGKSIMPGL FDAHAHGPQA
DEEIIPQQNW TLYSGLSLGV TAIHDPSNDT TEIFAASEQQ KAGSIVGPRI FSTGTILYGA
NAPGYTSHVD SLDDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG
SLLQHNLSMV VDGHTTLEHS LPVGAIYSDI KQLWSQTKVS YTPTLVVAYG GISGENYWYD
KTDVWAHPRL SAYVPADILQ ARSMRRPTAP DGHYNHFNVA KVAKALNDVG VKANIGAHGQ
REGLAAHWEM WMFAQGGMSN QEVLKTSTIN PATTFGMDHQ LGSIKTGKLA DLIVIDGNPL
EDIRVTDKVV YTMTNGRLFN AETMNELNGD KHQRNPFFFE KANKQ
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