| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1318 |
|---|
| Symbol | |
|---|
| ID | 4010830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1389456 |
|---|
| End bp | 1390139 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637953905 |
|---|
| Product | peptidase C56, PfpI |
|---|
| Protein accession | YP_556525 |
|---|
| Protein GI | 91781318 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG CAAAAGCACA GGTAGCTGTT CTCGTCGAGC ATCTGTATCA GGAGCTCGAA
CTGTGGCATC CGGTTCTGCG CCTACGCGAG GCCGGCGCTA ATGTCTTGCT GGTGGGGCCT
GATACCAGAC TGGTCTATTC AAGCAAGCTC GGATATCCAG CACGCCCCGA TCTATCGATC
GACGATGTCA AGGCCGAGGA TTTCGACGCG GTCGTGATAC CTGGCGGATT TGCGCCGGAA
GGCATGAGGC GGCACCCCGC AATGATCGAA TTCGTTCGGG AGATGGACGC GCAAGGCCGT
CTGATTGCCG CAATCTGTCA CGCGGGTCTG GTGCTCGCGT CGGCCCAGAT TGCTCGCAAT
CGTAAGCTGA CGTGCGTGTC GCTCGTGAAG GACGACGTCA TCAACGCGGG GGCCAATTAC
GTGAACGAGG GTCTTGTCAT CGACCACAAC ATCATCACGT CCCAGTTGCC CAGTGATCTG
CCGGTGTTCG GCAAAGCCAT TGTCGATTAC CTGTCCAGTA ACGACGTCGA GCCGGGCGCT
GCCCGCCGGC TCGCGCCAGC CGACGGACGA AAGCCGTCTC CGGTGGCCTA CCTCGAGCCG
GTCGAGCTGA TCATGGGGCC GCGCGGGCGG GCGTCGGCAA ACTACACGAC GCTTGCAATC
GCCGCCTCCG GCGCATCAGC TTAA
|
|---|
| Protein sequence | MDIAKAQVAV LVEHLYQELE LWHPVLRLRE AGANVLLVGP DTRLVYSSKL GYPARPDLSI
DDVKAEDFDA VVIPGGFAPE GMRRHPAMIE FVREMDAQGR LIAAICHAGL VLASAQIARN
RKLTCVSLVK DDVINAGANY VNEGLVIDHN IITSQLPSDL PVFGKAIVDY LSSNDVEPGA
ARRLAPADGR KPSPVAYLEP VELIMGPRGR ASANYTTLAI AASGASA
|
|---|
| |