| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1257 |
|---|
| Symbol | |
|---|
| ID | 4010769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1312875 |
|---|
| End bp | 1314755 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637953847 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_556467 |
|---|
| Protein GI | 91781260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0287082 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGT CTGAGTCGGG TGTGCGAAGC GAACTGGGCG CCACGCCGGG ACGCATGGCA
AAAGCATGCG CAACCGCGAG CCGCCCGGTG CCCGGCCTGC GGGTGGGTGT CACGGGACAT
CGCAAGCTCC CGTTCGCCGA CCTTGCGCTT CTCGATGCGA CGGTCGGGAA AATCCTTGAT
GCGATTGCGG ACACCCTGAA CGCGCTCGCG AGCGATCGCG CATTGCACCG GTTTTACCAG
CAGGAGAAGC CCGTTCTGCG GATGGTTTCG CCGCTCGCGC CGGGCGCGGA CCGCGTGGTT
GCGCGCCAGG CCGTTGCGCG CCAGTGGCTG CTTTCGGCAC CGTTGCCGTT CCCGCAGCAG
GAATACGAAA AGGACTTCGT TGACAGTGTC GACGAGTTTC GCAGCCTGTT GGCACAGGCA
AAAGCGATCG GCGAGGTGGC CGAACTCGAC GGACGGCGCG AAGCGGAAGG CGCCGCCTAT
TTCGAGGCGG GACACTTCGT GCTGCACCAT TGCGACGTGC TGATTGCCAT ATGGGACGGT
CTCGAAGCGG CCGGGGAAGG CGGCACTGGC GAGATTGTGG AAACGGCAAC GAGGCTCGGT
TTGCCGGTCG TTCATATCGA TTCGGCTGCG CCGCACGCTG TCGAACTGCT GTTTGACCCG
CTTCCGGGCG AAAGCGGCCG CAGCCTGACG ATCGAGGAGA TCGTTCGCCT GATCGTGGTG
CCGGCGTGGC CGCGAGGCTC GCTCGGCTCA ACCAGCAAAC GCCATCACCA CAAGGCCGCC
GAGACGTATT TGTGGGACGA ACCGGAGAGC GTGTGCGCCG ATGGCACGGA GCTGTCGCGT
GCGGGTTTGA AGGCCACGCC TTTGACATGG CTGAGCCGCA TTTTTCCATT CTTGCAGCGA
TGTGTGGCGG GCGTGGACGC ATCGTCTTCC ATCGCCGTGG AAGAGAACCC GCCGGCAGTC
GCCGGCAGCC AGGCCGCGCA GACATATGTC GCCCACTTCC GGAGATCCGA TGCATTGGCC
ACCCACTACG CGAACATACA TCGGAGCGCT TTTGTGCTGA TTTATCTTGT GGGCTCGATA
TCGCTCGTCG CTGCATTCAC GGCACTTTCC TTTAAAGTCA TGCACCAGGA CCAGTCGGGA
TTCGACGTTG GGGCGATCTT CGTGGAACTG GGCGCCCTTG TCATTGTTCT TGCTCTCGTG
TTGGCGGAAC GGCGGTGTCG CTGGCGGGAA CGATGGCTCG ATTACAGAAC GCTCGCGGAG
CAGTTTCGGC AGGCGGATTT GCTGGCGGCA ATTGGAGGCT CGGAGCCGTG CGGGTGCATG
AACCTCAATA GCGAGATTCA CCCGATGCGC GGCTGGGTGC CATGGTTCGT CGCTGCGGTG
ACGCGCTCGG TCGGAATAGT CGGCGCACGA TATGACGCGA CCTACCTCTG CGGCATCCGC
GACCATACAG TCAGGCAAAG ATTGCGCGAC CAGATTGCCT ACAACGAGGC CGCGGTGCGC
CGTAACGCAA AGATAGGCAA ACGTCTTCGG CTGATCAGCG AGCTTCTCTT CTGGGGAACC
GTGGGCGCGG TCTGTATCGA GCTTTTCTGG CCGGGCGCAC GGCACGTTGC CTTGTGGGGC
TGGCTAGCCG GTATCTTCCC TGCCGCGGGC GCCGCAGGTT TCGGCATCCG CAATCAGGCC
GAATTCGAGA TCGTCGTCCA TCGGTCGGCA CGGCTCATCG GACTGCTGGC GATAGAGAAG
GCGAATATGG AAAAACTCAC GGGCGACCGG CTCACCAGCA AATCCCTGCG CCGGGCGGTG
CAGAAAAGCG CGCATATCAT GCAGGACGAT TCGCGCGCGT GGGCGGAGAT TTTCGAGGTC
AAGGAATCGG AAGTTGTTTA G
|
|---|
| Protein sequence | MAESESGVRS ELGATPGRMA KACATASRPV PGLRVGVTGH RKLPFADLAL LDATVGKILD
AIADTLNALA SDRALHRFYQ QEKPVLRMVS PLAPGADRVV ARQAVARQWL LSAPLPFPQQ
EYEKDFVDSV DEFRSLLAQA KAIGEVAELD GRREAEGAAY FEAGHFVLHH CDVLIAIWDG
LEAAGEGGTG EIVETATRLG LPVVHIDSAA PHAVELLFDP LPGESGRSLT IEEIVRLIVV
PAWPRGSLGS TSKRHHHKAA ETYLWDEPES VCADGTELSR AGLKATPLTW LSRIFPFLQR
CVAGVDASSS IAVEENPPAV AGSQAAQTYV AHFRRSDALA THYANIHRSA FVLIYLVGSI
SLVAAFTALS FKVMHQDQSG FDVGAIFVEL GALVIVLALV LAERRCRWRE RWLDYRTLAE
QFRQADLLAA IGGSEPCGCM NLNSEIHPMR GWVPWFVAAV TRSVGIVGAR YDATYLCGIR
DHTVRQRLRD QIAYNEAAVR RNAKIGKRLR LISELLFWGT VGAVCIELFW PGARHVALWG
WLAGIFPAAG AAGFGIRNQA EFEIVVHRSA RLIGLLAIEK ANMEKLTGDR LTSKSLRRAV
QKSAHIMQDD SRAWAEIFEV KESEVV
|
|---|
| |