Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1233 |
Symbol | |
ID | 4010745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1288520 |
End bp | 1289362 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637953823 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_556443 |
Protein GI | 91781236 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0156819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCA AGCCACGATC GTTTGTCGGA CGGGTCCGCG CGACGATGGA CGCCCTGTCC GCAACCGAGA GACGTCTGGC CGAGTTCGTC CTCGAATTCC CGGGTGACCT GGCCAGCTAC ACCGCCGCGG AGCTCGGCAA GCTCGCGAAT GTGTCGAACG CGACGGTGAG CCGCTTCTTT CGGCATCTTG GCTACAGCAG CTACGAGGAA GCGCGCCGGC ACGTGCGCGA CGACAAGAAG GATGGTGCGG CCTTGCTGCT CACCGGTGCG GATGCCGGTC AGGACGAGCA GGGGGTCGCC GCGCATGCGC AACTCGGGAT TGCGAATCTG ACGCGCACGT TCGCCGAGTT GTCCGATGCG ATGCTCGACG AGATAGCCGG CGCGGTCGTC GGTGCGCAAC AGGTCCTCGT GTTCGGCTTT CGCAGCAGCC AGGCCTTCGC GAGCTACTTC CGCTGGCAGA TCCTGCAGGT GGTCGAGCGC GTGATCGCGC TGCCCGGACC GGGCGAGACC CTCGGCGAGC ATCTGGTCGG ACTGGACCGC AAGTCGGTCG TGATCGTGTT CGGTCTGCGG CGCCGGGTTC CGCAGACCGA CGCGGTGATC GAGTATGCGG CGCGTGCCGG CGCGCGCGTG CTGTATGTGA CCGATCGCAG CAGTCCGGCG CGCGCGGGCG CCACGTGGAC AATCATCTGC GAAACGTCGG CGCCCGGTCC GCTCGACAAT CACGTCGCGG TGCTGGGGGT ATGCGGCGCG CTGGCCACCA AGGTGTTCCA GCAGGCGTCG AGCCAGGGCA GGAAGCGGCT TAGCGGAATC GAGTCCGCGC ACGACGCGCT CGGCGAAATG TGA
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Protein sequence | MPAKPRSFVG RVRATMDALS ATERRLAEFV LEFPGDLASY TAAELGKLAN VSNATVSRFF RHLGYSSYEE ARRHVRDDKK DGAALLLTGA DAGQDEQGVA AHAQLGIANL TRTFAELSDA MLDEIAGAVV GAQQVLVFGF RSSQAFASYF RWQILQVVER VIALPGPGET LGEHLVGLDR KSVVIVFGLR RRVPQTDAVI EYAARAGARV LYVTDRSSPA RAGATWTIIC ETSAPGPLDN HVAVLGVCGA LATKVFQQAS SQGRKRLSGI ESAHDALGEM
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