Gene Bxe_C1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1233 
Symbol 
ID4010745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1288520 
End bp1289362 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID637953823 
ProductRpiR family transcriptional regulator 
Protein accessionYP_556443 
Protein GI91781236 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0156819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCA AGCCACGATC GTTTGTCGGA CGGGTCCGCG CGACGATGGA CGCCCTGTCC 
GCAACCGAGA GACGTCTGGC CGAGTTCGTC CTCGAATTCC CGGGTGACCT GGCCAGCTAC
ACCGCCGCGG AGCTCGGCAA GCTCGCGAAT GTGTCGAACG CGACGGTGAG CCGCTTCTTT
CGGCATCTTG GCTACAGCAG CTACGAGGAA GCGCGCCGGC ACGTGCGCGA CGACAAGAAG
GATGGTGCGG CCTTGCTGCT CACCGGTGCG GATGCCGGTC AGGACGAGCA GGGGGTCGCC
GCGCATGCGC AACTCGGGAT TGCGAATCTG ACGCGCACGT TCGCCGAGTT GTCCGATGCG
ATGCTCGACG AGATAGCCGG CGCGGTCGTC GGTGCGCAAC AGGTCCTCGT GTTCGGCTTT
CGCAGCAGCC AGGCCTTCGC GAGCTACTTC CGCTGGCAGA TCCTGCAGGT GGTCGAGCGC
GTGATCGCGC TGCCCGGACC GGGCGAGACC CTCGGCGAGC ATCTGGTCGG ACTGGACCGC
AAGTCGGTCG TGATCGTGTT CGGTCTGCGG CGCCGGGTTC CGCAGACCGA CGCGGTGATC
GAGTATGCGG CGCGTGCCGG CGCGCGCGTG CTGTATGTGA CCGATCGCAG CAGTCCGGCG
CGCGCGGGCG CCACGTGGAC AATCATCTGC GAAACGTCGG CGCCCGGTCC GCTCGACAAT
CACGTCGCGG TGCTGGGGGT ATGCGGCGCG CTGGCCACCA AGGTGTTCCA GCAGGCGTCG
AGCCAGGGCA GGAAGCGGCT TAGCGGAATC GAGTCCGCGC ACGACGCGCT CGGCGAAATG
TGA
 
Protein sequence
MPAKPRSFVG RVRATMDALS ATERRLAEFV LEFPGDLASY TAAELGKLAN VSNATVSRFF 
RHLGYSSYEE ARRHVRDDKK DGAALLLTGA DAGQDEQGVA AHAQLGIANL TRTFAELSDA
MLDEIAGAVV GAQQVLVFGF RSSQAFASYF RWQILQVVER VIALPGPGET LGEHLVGLDR
KSVVIVFGLR RRVPQTDAVI EYAARAGARV LYVTDRSSPA RAGATWTIIC ETSAPGPLDN
HVAVLGVCGA LATKVFQQAS SQGRKRLSGI ESAHDALGEM