Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1232 |
Symbol | |
ID | 4010744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1287219 |
End bp | 1288427 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637953822 |
Product | OmpC family outer membrane porin |
Protein accession | YP_556442 |
Protein GI | 91781235 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000106128 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAGAT TAGGAATCCT TGTTTTATCG GCAACAACCG GTTTTGTCTC GGGTGCGGCT TGGGCGGAGA ATTCGGTGAC GCTGTACGGC ATCGTCGATG CGGGCATTCA GTACAACAGC GACGTCGCGG TTGCGCAGAA CATAGGTGCC GCGGGGCGGC CGGTGAACTA TGCGAGCAAG GGACGGCTCG GCTTTCAGAG CGGCGCCGAC TACGGCGACC GCTGGGGCCT GAAGGGCGTC GAAGATCTGG GGGACGGCTA TACAGCGATC TTCCAGCTCG AGAATTGGTT CAACATCGGC AATGGCGCGT TGAACGTCAG CAGCAGCACA TTGTGGGGCC GTCAGGGGTA CATGGGCTTG AACAGCACGC GCTATGGTAC CTTGACCTTC GGGCGCCAAT ACGACGTAAC CAACGACCTG GTCGAGTATT ACGGGCCGGA TTCCGCGGGC GGAATCGGCA CCTATCCGGG CGACTTGTCG AACTTCGACG GAAGTATTCG CATCAACAAC TCGATCAAGT ACCGCACGCC GACCATCGAT CACCTGACTG GCGAGATCGT TTATGGCTTC GGTGGGGTAG CGGGATCCGC ATGGCGGAAC AGCACGCTGA GCGTCGGCGC AAATTACGTC GCGGGGCCGG TCGCGGTGGG TGCCGCGTAC ATGCGGATGG ATAACAGCGG GGCCACCGGC AATACGTGGT CGTCGGCATC GGCGGACAGC AATTTCGGTT CGTCGGTCAC CGCCGGTTTC GCCGGCGCGC GGGCGGTGCA GACTGCCAAC GCGATCGCGG CATATACGTT CGGCACGCTG ATGCTCGGTG TGAACTATGG CTACACGCAG TATCGGCCGT CGGCGCTGTC ATCGTTCCAT CAGGTGGTCG CCTACAACTC CGCCGGTATC GCGATGCGCT ATCAGTACAG CACCACAATG AGCTTCGCAT TGAGCCCGAC CTACACGCGC GGGCAATCGG TCGGCGACGG GAAAGCGCGG CCGTGGTACG CAAGCATCGC CGGGGTCGGG TTCTACAATC TGAGCAAGCG CACCTCGTTC TATTTGTACG GTGGGTATCA GCGTGCGGGT GGCGATACGT TCGACGCGTT CGGCAACCTT GTGGCGGCGA CGCCGTCGCT CGGCGACGCC GCCAACGGTT CTTCGTCGGG GTCTCGCAAT CAGGCGTTGA TCCGCATCGG GATGTTCAAC AAGTTCTGA
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Protein sequence | MNRLGILVLS ATTGFVSGAA WAENSVTLYG IVDAGIQYNS DVAVAQNIGA AGRPVNYASK GRLGFQSGAD YGDRWGLKGV EDLGDGYTAI FQLENWFNIG NGALNVSSST LWGRQGYMGL NSTRYGTLTF GRQYDVTNDL VEYYGPDSAG GIGTYPGDLS NFDGSIRINN SIKYRTPTID HLTGEIVYGF GGVAGSAWRN STLSVGANYV AGPVAVGAAY MRMDNSGATG NTWSSASADS NFGSSVTAGF AGARAVQTAN AIAAYTFGTL MLGVNYGYTQ YRPSALSSFH QVVAYNSAGI AMRYQYSTTM SFALSPTYTR GQSVGDGKAR PWYASIAGVG FYNLSKRTSF YLYGGYQRAG GDTFDAFGNL VAATPSLGDA ANGSSSGSRN QALIRIGMFN KF
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