| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1162 |
|---|
| Symbol | |
|---|
| ID | 4010674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1218685 |
|---|
| End bp | 1219599 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637953756 |
|---|
| Product | polar amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_556376 |
|---|
| Protein GI | 91781169 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0158774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGA AGACCTTACG CTCGATGTCT GCCGCTTGCC TCGTGGGCGG CGCCCTGTTA
CTCACCACCA CGGGCTTCGC CTTCGCCGAC GATGCCATCA CGAAATCGGT AACCACCGAC
CCGGCGCTGC ACGCGATGCT GCCCAAGGAA ATCAGGGATG CCGGTGTCAT CACGTTGGCG
ACCGACGCGC ACTATCCGCC CTGCGAATCC TTTGCCGACG ATAACGTGAC CATGATCGGC
TGGGAGCCCG ATTTCTGGGA TGCGCTCGGC AAAAAGCTCG GCGTCAGGGT CAAGCCTGGC
TCGCTGGATT TCGACAATCT CATTCCGAGC ATTCAGAGCG GGCGTTCCGA TATCGCCATG
GAATGCATCT CCGATTCGCT GGAACGCGAG AAGCAGGTGC TGTTCGTCGA TGTGTCGATT
TCGACCAATG GCGTCTACGC GCTGGGTAAC AGCCCGATCA CCAGCGATCC CCTGTCGCTG
TGCGGACTCA AGAGCGGTTC GCAGACCGGC ACGACGTTCG GAGCCAGCGT GGACACGGTG
CTTTCGCCGC TGTGCGTCAA AAACGGCAAA CCCGCGATCA CCAAAGTCGA ATTTCCTTCG
GAAGACGCGA CGCTGCTCGC CCTTTTGTCC GGCCGGGTGG ACTTTCTGGT CAATGACGCT
TCGTCGGCGG CCGAGCTGAA AAAGAAATCG CAGAAGCCGA TCAAGCTCGT CACGCTGAGC
GTTCTCCCCA AGTGGTTCGA CGGAATCATC ATGAAGCCCC AGCGGACGGA CCTCGCCAAA
GCGCTGCTGG CCGGCACCCA GGCGATTATC GCCGACGGGA CCTACGACAG GATTATGAAC
AAGTGGCAGC TCGACGCGGT CAAACTCGAG ACCCCCGGAA TCAACCTGGT TTCCCACGGT
GCGGTCGCCA GGTAA
|
|---|
| Protein sequence | MLLKTLRSMS AACLVGGALL LTTTGFAFAD DAITKSVTTD PALHAMLPKE IRDAGVITLA
TDAHYPPCES FADDNVTMIG WEPDFWDALG KKLGVRVKPG SLDFDNLIPS IQSGRSDIAM
ECISDSLERE KQVLFVDVSI STNGVYALGN SPITSDPLSL CGLKSGSQTG TTFGASVDTV
LSPLCVKNGK PAITKVEFPS EDATLLALLS GRVDFLVNDA SSAAELKKKS QKPIKLVTLS
VLPKWFDGII MKPQRTDLAK ALLAGTQAII ADGTYDRIMN KWQLDAVKLE TPGINLVSHG
AVAR
|
|---|
| |