Gene Bxe_C1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1086 
Symbol 
ID4010598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1129095 
End bp1131299 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content59% 
IMG OID637953683 
Productexopolysaccharide transporter 
Protein accessionYP_556303 
Protein GI91781096 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.111926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCG TAAACAAAAA TCGATTCATC GATTCGTCGG ACGGTGACGA AATACATCTC 
TCCGACTATC TTTCCGTCGT TGCGGAGAGC TGGAAGCTGA TCGTTGCGAT CGCAGCGACC
GTATTGATAA TCGGGACTCT CTATGCGTTT ATCGCAAGGC CGGTGTATCG CGCGGACGCG
ATGATCCAGG TCGAGGACAG CGCCAATGCT ACCAAGGACG CGCTGGGCGA ACTGGCCTCC
ATCTTCGACA CCAAGCAGAC CGCCGACGCG GAGATCGAGC TGATCCGCTC GCGACTCGTG
GTCGGCCAGA CAGTGCAATC ACTGCACCTC GATATCAGCG CTCAGCCGCG TTATTTCCCA
CTGGTCGGCG CCATACTGGC ACGGCATGCC GGCGACAACC AGTTGACGCC GCCGCTATTC
GGCCTGGTGC GCTTCGCGTG GGGCGGCGAG AAGATCGACG TATCGCTATT CGATGTGCCG
CATGACCGAT ACGACGTGAG ATACACATTG GTGGCGCGCG GCGGTGACAA ATTCGATCTG
CTCGATCCTG ATGGCGACGT TGTTCTTCAC GGACAGGTGG GCAGCGTCGC CCACGGCAGC
GATCCAGCGG GCCCGGTTGA ATTGCGGGTA GCGCGTCTCG AGGCGAGACC AGGCACACAC
TTCATTCTCA GCCGCGCCTC CACGCTCCTC ACGATCGATC AGTTGCAGAA TGCACTCGTC
ATCGCCGAGA AAACCAAGCA ATCCGGCGTG ATAGGTGTCT CGCTCGATGG CGCGGACAGC
AGGCGCACCG CCGAGATCAT CAATACGATT GCCGCAACCT ATGTCCAGCA GAACATCGAC
CGGAAGTCCG CCGAAGCGGA GCACACGCTC AGCTTTCTGG ACCAGCAACT GCCGCAACTG
CGCACACAGC TCGATCAGGC GGAGGATCGC TATAACGCAT TTCGCAACCA GAAGGGAACA
GTCGATCTGA CCGAGGAAAG CCGCCTGCTG CTGCAGCAGA TAGTCGACAG CAAAACCAAA
CTCGTCGATC TGCAGCAACA GCAGATAGAG ATGGCGCAGC GTTTTACACC ATCGCACCCT
GGGGTGGTGG CATTGGATGC GCAGATCGCC TCGCTCGAAG AGCAACAGAC CCAGTTGAAC
AAGCGCGTGT CGACTTTGCC GGACACGGAG CAATCCGCCC TGCGCCTGCT GCGTGATGTG
CGTGTCAACA CGGAGTTGTA CACGAATCTG TTGGACAGCG CACAGCAGTT GCGGATCGTC
AAGGCCGGAC AGGTCGGGAA CGTCCGCGTG GTTGACCGCG CCGTCGCGGG CGAGGTGCCG
GTCAAGCCCA AACGGGCGCT GGTGGTTGTG CTGGCGGCAG TGTTGGGGCT TATTGCGGGG
ACAGCAGCGG CGTTCGTCAA AAATGCATTG TTCGGCGGCG TGGAAAACAG CGAAGAAATC
GAACAGGCGC TGGGCTTGCC GGTCTACGCG GCGGTGCCGC ACAGTGAAAC GCAGGTGCGT
CTGTATCAAG CCATGCGGCG TGGCCGCTCC GGTCATCACG TGCTTGCCTC GATTGCCTCG
CATGACGTCG CCATTGAAGG GATCCGAAGT CTGCGCACCG CGCTGCAGTT CGGCTTGCTC
GATGCTGCCA ATAACATAAT CGTCATTGCC GGTCCGCGTC CCGAGGTCGG GAAGTCCTTC
ATGTCGGTGA ATCTCGCGGC CGTGCTCGCG AGCGGCGGCA AGCGCATCCT GTTGATCGAT
GCCGATATGC GGCGCGGCGA CTTGCACGGC TATTTCGGCG TGTCCAGAGA GCCGGGACTT
TCGGATGTCA TCGCGGGATT GGACATCAGC GGTGCGGTGC TGCGTGACGT ATTGCCGAAT
CTGGATGTTT TACCGAAGGG CCTATTACCG CCGAATCCCG CCGAGCTGCT GATGAGCGAG
CGCTTTAAAA CGGTGCTTGA GCAGGTCTCG AGTCTTTACG ACATCGTCAT TGTCGATACA
CCGCCGTTGC TGGCGGTGAC CGATGCGGCG CTGATCGGTA AGAACGCAGG TACGACCTTA
CTGGTGGTAC GTCATGGCCG TCATCCCATG GCGGAGATTC TGGAATGCAC CAACCGTCTG
CGTAATGTCG GCGTCGCCCT GAAGGGCGTG CTGATTACCG ATGTGCCGCA GAGACGTCTT
GGCTATGGCA CGTATTACTA CAGTTACGAA AGCAACGCGA AATAA
 
Protein sequence
MASVNKNRFI DSSDGDEIHL SDYLSVVAES WKLIVAIAAT VLIIGTLYAF IARPVYRADA 
MIQVEDSANA TKDALGELAS IFDTKQTADA EIELIRSRLV VGQTVQSLHL DISAQPRYFP
LVGAILARHA GDNQLTPPLF GLVRFAWGGE KIDVSLFDVP HDRYDVRYTL VARGGDKFDL
LDPDGDVVLH GQVGSVAHGS DPAGPVELRV ARLEARPGTH FILSRASTLL TIDQLQNALV
IAEKTKQSGV IGVSLDGADS RRTAEIINTI AATYVQQNID RKSAEAEHTL SFLDQQLPQL
RTQLDQAEDR YNAFRNQKGT VDLTEESRLL LQQIVDSKTK LVDLQQQQIE MAQRFTPSHP
GVVALDAQIA SLEEQQTQLN KRVSTLPDTE QSALRLLRDV RVNTELYTNL LDSAQQLRIV
KAGQVGNVRV VDRAVAGEVP VKPKRALVVV LAAVLGLIAG TAAAFVKNAL FGGVENSEEI
EQALGLPVYA AVPHSETQVR LYQAMRRGRS GHHVLASIAS HDVAIEGIRS LRTALQFGLL
DAANNIIVIA GPRPEVGKSF MSVNLAAVLA SGGKRILLID ADMRRGDLHG YFGVSREPGL
SDVIAGLDIS GAVLRDVLPN LDVLPKGLLP PNPAELLMSE RFKTVLEQVS SLYDIVIVDT
PPLLAVTDAA LIGKNAGTTL LVVRHGRHPM AEILECTNRL RNVGVALKGV LITDVPQRRL
GYGTYYYSYE SNAK