Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1086 |
Symbol | |
ID | 4010598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1129095 |
End bp | 1131299 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637953683 |
Product | exopolysaccharide transporter |
Protein accession | YP_556303 |
Protein GI | 91781096 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.111926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCG TAAACAAAAA TCGATTCATC GATTCGTCGG ACGGTGACGA AATACATCTC TCCGACTATC TTTCCGTCGT TGCGGAGAGC TGGAAGCTGA TCGTTGCGAT CGCAGCGACC GTATTGATAA TCGGGACTCT CTATGCGTTT ATCGCAAGGC CGGTGTATCG CGCGGACGCG ATGATCCAGG TCGAGGACAG CGCCAATGCT ACCAAGGACG CGCTGGGCGA ACTGGCCTCC ATCTTCGACA CCAAGCAGAC CGCCGACGCG GAGATCGAGC TGATCCGCTC GCGACTCGTG GTCGGCCAGA CAGTGCAATC ACTGCACCTC GATATCAGCG CTCAGCCGCG TTATTTCCCA CTGGTCGGCG CCATACTGGC ACGGCATGCC GGCGACAACC AGTTGACGCC GCCGCTATTC GGCCTGGTGC GCTTCGCGTG GGGCGGCGAG AAGATCGACG TATCGCTATT CGATGTGCCG CATGACCGAT ACGACGTGAG ATACACATTG GTGGCGCGCG GCGGTGACAA ATTCGATCTG CTCGATCCTG ATGGCGACGT TGTTCTTCAC GGACAGGTGG GCAGCGTCGC CCACGGCAGC GATCCAGCGG GCCCGGTTGA ATTGCGGGTA GCGCGTCTCG AGGCGAGACC AGGCACACAC TTCATTCTCA GCCGCGCCTC CACGCTCCTC ACGATCGATC AGTTGCAGAA TGCACTCGTC ATCGCCGAGA AAACCAAGCA ATCCGGCGTG ATAGGTGTCT CGCTCGATGG CGCGGACAGC AGGCGCACCG CCGAGATCAT CAATACGATT GCCGCAACCT ATGTCCAGCA GAACATCGAC CGGAAGTCCG CCGAAGCGGA GCACACGCTC AGCTTTCTGG ACCAGCAACT GCCGCAACTG CGCACACAGC TCGATCAGGC GGAGGATCGC TATAACGCAT TTCGCAACCA GAAGGGAACA GTCGATCTGA CCGAGGAAAG CCGCCTGCTG CTGCAGCAGA TAGTCGACAG CAAAACCAAA CTCGTCGATC TGCAGCAACA GCAGATAGAG ATGGCGCAGC GTTTTACACC ATCGCACCCT GGGGTGGTGG CATTGGATGC GCAGATCGCC TCGCTCGAAG AGCAACAGAC CCAGTTGAAC AAGCGCGTGT CGACTTTGCC GGACACGGAG CAATCCGCCC TGCGCCTGCT GCGTGATGTG CGTGTCAACA CGGAGTTGTA CACGAATCTG TTGGACAGCG CACAGCAGTT GCGGATCGTC AAGGCCGGAC AGGTCGGGAA CGTCCGCGTG GTTGACCGCG CCGTCGCGGG CGAGGTGCCG GTCAAGCCCA AACGGGCGCT GGTGGTTGTG CTGGCGGCAG TGTTGGGGCT TATTGCGGGG ACAGCAGCGG CGTTCGTCAA AAATGCATTG TTCGGCGGCG TGGAAAACAG CGAAGAAATC GAACAGGCGC TGGGCTTGCC GGTCTACGCG GCGGTGCCGC ACAGTGAAAC GCAGGTGCGT CTGTATCAAG CCATGCGGCG TGGCCGCTCC GGTCATCACG TGCTTGCCTC GATTGCCTCG CATGACGTCG CCATTGAAGG GATCCGAAGT CTGCGCACCG CGCTGCAGTT CGGCTTGCTC GATGCTGCCA ATAACATAAT CGTCATTGCC GGTCCGCGTC CCGAGGTCGG GAAGTCCTTC ATGTCGGTGA ATCTCGCGGC CGTGCTCGCG AGCGGCGGCA AGCGCATCCT GTTGATCGAT GCCGATATGC GGCGCGGCGA CTTGCACGGC TATTTCGGCG TGTCCAGAGA GCCGGGACTT TCGGATGTCA TCGCGGGATT GGACATCAGC GGTGCGGTGC TGCGTGACGT ATTGCCGAAT CTGGATGTTT TACCGAAGGG CCTATTACCG CCGAATCCCG CCGAGCTGCT GATGAGCGAG CGCTTTAAAA CGGTGCTTGA GCAGGTCTCG AGTCTTTACG ACATCGTCAT TGTCGATACA CCGCCGTTGC TGGCGGTGAC CGATGCGGCG CTGATCGGTA AGAACGCAGG TACGACCTTA CTGGTGGTAC GTCATGGCCG TCATCCCATG GCGGAGATTC TGGAATGCAC CAACCGTCTG CGTAATGTCG GCGTCGCCCT GAAGGGCGTG CTGATTACCG ATGTGCCGCA GAGACGTCTT GGCTATGGCA CGTATTACTA CAGTTACGAA AGCAACGCGA AATAA
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Protein sequence | MASVNKNRFI DSSDGDEIHL SDYLSVVAES WKLIVAIAAT VLIIGTLYAF IARPVYRADA MIQVEDSANA TKDALGELAS IFDTKQTADA EIELIRSRLV VGQTVQSLHL DISAQPRYFP LVGAILARHA GDNQLTPPLF GLVRFAWGGE KIDVSLFDVP HDRYDVRYTL VARGGDKFDL LDPDGDVVLH GQVGSVAHGS DPAGPVELRV ARLEARPGTH FILSRASTLL TIDQLQNALV IAEKTKQSGV IGVSLDGADS RRTAEIINTI AATYVQQNID RKSAEAEHTL SFLDQQLPQL RTQLDQAEDR YNAFRNQKGT VDLTEESRLL LQQIVDSKTK LVDLQQQQIE MAQRFTPSHP GVVALDAQIA SLEEQQTQLN KRVSTLPDTE QSALRLLRDV RVNTELYTNL LDSAQQLRIV KAGQVGNVRV VDRAVAGEVP VKPKRALVVV LAAVLGLIAG TAAAFVKNAL FGGVENSEEI EQALGLPVYA AVPHSETQVR LYQAMRRGRS GHHVLASIAS HDVAIEGIRS LRTALQFGLL DAANNIIVIA GPRPEVGKSF MSVNLAAVLA SGGKRILLID ADMRRGDLHG YFGVSREPGL SDVIAGLDIS GAVLRDVLPN LDVLPKGLLP PNPAELLMSE RFKTVLEQVS SLYDIVIVDT PPLLAVTDAA LIGKNAGTTL LVVRHGRHPM AEILECTNRL RNVGVALKGV LITDVPQRRL GYGTYYYSYE SNAK
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