| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1042 |
|---|
| Symbol | |
|---|
| ID | 4010555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1079671 |
|---|
| End bp | 1080456 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637953640 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_556260 |
|---|
| Protein GI | 91781053 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.00956933 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTAAAC TCGCAACTGG ACAAACGTTG CGCTCAGCCG AACGTATGCT CGATGTCCTG
AAGGTGTTTT CAACCGACGA GCCTGCGCTG ACGGTGTCGG AAATCACCGG CCGGCTCGGG
CTTGCGCCGA GCACCGTTCG GCGCATCCTG GACGCGCTGG AGAGCAAGGG GTTTGTGAGG
CTGGACACGC GAACCGGAAA GTACTCCCCG TTCGTCGAGA TCGTCCGGCT CGCGGCCGCG
GCGGTGCAGG GCAACGATTT GATATCGGGC GCGAGCCAGC CGCTCGACGA CCTGCGGGAT
CGGACCGGCG AGAATGTTCA ATTGACCGTG CTCGTCGAGA ACGACGTGGT GTTCGTCGAT
CGCCGCGTGA CAAATCAGAC GATCAAGATT TTCAGCCCGA TCGGATACCG GCGGCCGCCG
TGGGACGGAC GTGCGTCGGG GCAGGTGCTG CTCGCGTGGC TGTCCGGCAA TCAGCTGGAG
GGGATTTTGC CGTCGCCGGC GCAATGGCGG CCCGGCGAGG TGCCGGGACT CGCCAGTCCG
AAAGCGTTCC TCGCGCTGCT CGCGGAGGTG CGCGAAAAGG GCTACGCGAT CAACGACGAG
TTCACCGAGC GGGACGTCTG GGCCGTCGCC GCGCCTATCC GCGACCACAC GCGGCAGGTG
ATCGCCGCCG TCAGCATTCC GGTGCTGAGG TCGCGCGTGA GCGACCCGAA GCGCGTTTCG
GAACTCGTCA ACGCGGTCAT GGCGGCCGGC CGGGAAATCT CCCACCGGTT GAGCTATTTC
GAGTAA
|
|---|
| Protein sequence | MPKLATGQTL RSAERMLDVL KVFSTDEPAL TVSEITGRLG LAPSTVRRIL DALESKGFVR
LDTRTGKYSP FVEIVRLAAA AVQGNDLISG ASQPLDDLRD RTGENVQLTV LVENDVVFVD
RRVTNQTIKI FSPIGYRRPP WDGRASGQVL LAWLSGNQLE GILPSPAQWR PGEVPGLASP
KAFLALLAEV REKGYAINDE FTERDVWAVA APIRDHTRQV IAAVSIPVLR SRVSDPKRVS
ELVNAVMAAG REISHRLSYF E
|
|---|
| |