Gene Bxe_C0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0938 
Symbol 
ID4010451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp974041 
End bp974808 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content58% 
IMG OID637953543 
Productbranched chain amino acid ABC transporter ATPase 
Protein accessionYP_556163 
Protein GI91780956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.248089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGT TGCCGAACTC GCACTACATC CTTGAAACGC GCAACCTGGT TAAGTCTTTC 
GGGAGCTTCG TCGCGGTCAA CGGATTGAGT CTTCGCGTTC GACCAGGGAC GATTCATTCA
TTGATCGGTC CGAATGGCGC GGGTAAGACC ACCGCGTTCA ACCTGCTCAC CAGATTCCTC
CAGCCGACGT CCGGCCAGAT CTTCTACAAA GGGCAGGACA TTACCCATTT CGGATCGGCG
CGTATTGCCC AACACGGGAT GGTGCGTTCG TTTCAGATCT CGGCGGTCTT TGCCCACATG
AGCGCTCACG AGAATGTACT GGTCGCACTG CAGCGAAAGA AACGCTGTGT CTACAAATTC
TGGTTATCGG AATCCATCCT CAAGCCGCTT CATGAACACG CGGACAGACT TCTAGATTCG
GTCGGTCTGC TGGCCGACCG CGGAACGCTG GCCGGCCAGC TTTCTTATGG CCGTCGGCGT
GCACTCGAGA TCGCGACCAC GCTGGCGCTC GAACCCGAGG TCATGCTGCT CGACGAGCCG
ACCGCGGGGA TGGGGCACGA GGACGTGGGG CGGATCGCAG ACCTGATCAA GTCGGCATCG
GCGGGCCGAA CCACACTGAT GGTCGAACAC AACTTATCCG TGGTTGCCGA CCTGTCGGAT
TCGATCACGG TACTTAGCCG CGGGCAGATC GTTGCTGAAG GATCGTATGC CGAAGTGTCG
GGGAATCCCG ACGTAATGAG CATCTACCTG GGGACCACCG ATGTCTGA
 
Protein sequence
MSQLPNSHYI LETRNLVKSF GSFVAVNGLS LRVRPGTIHS LIGPNGAGKT TAFNLLTRFL 
QPTSGQIFYK GQDITHFGSA RIAQHGMVRS FQISAVFAHM SAHENVLVAL QRKKRCVYKF
WLSESILKPL HEHADRLLDS VGLLADRGTL AGQLSYGRRR ALEIATTLAL EPEVMLLDEP
TAGMGHEDVG RIADLIKSAS AGRTTLMVEH NLSVVADLSD SITVLSRGQI VAEGSYAEVS
GNPDVMSIYL GTTDV