| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0935 |
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| Symbol | |
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| ID | 4010448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 969997 |
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| End bp | 971115 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637953540 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556160 |
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| Protein GI | 91780953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000655737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAA AATTTGCATT ACTAATGTTA TTCCTGTCTT TCTGCACTGT CTGTCGAGCA
CAGTCCTCTG TGACCCTATA CGGTATCCTG GACCAGTTCG TAGCCTATGA GCACACAAGC
AGCGGTAAGT CGCTGGTGGC CTTGGGGGAC GGCGCACTCG CTCGCAGCAG AATCGGGTTC
AAGGGAGTTG AGGATATCGG TGGCGGCTAT CAAATTATCT TTCAACTGGA AAGTGGGTTC
AACGCCGATA GCGGCGCATT GGCAGACAGC AGCCGGCTCT TTGATCGGCA GGCATGGGTC
GGCATCAACA CGCCGGTTGG GCAATTTCGC GTCGGCCGAC AGAACTCGGC GGCATTTAAT
AGTTCTCCGG AAATTGACTG GTCATCTCGC GCGATGCTGA CCTCTATTGT GAACAATTTC
GGTCTTCCGG GGCGCTACGA CGATGACATT GTGTACAAGT CACCACGTGT TTATGACTTT
CAGATTGAGG CGCACTATGC AATGCCCGGT ATCGCGGGAG GTGGGTTGAA TCGCGGTGCC
GTTTATCAAA TCTGGGTCGA CTGGGCGCAC GGGCCATATC AGGCTGCCTA CGTAGGAACC
GTCGCGGTCC CGCTAGCCAG TGCAATCTAT AAAGAGGTGG TTCAATATCA TCAATTTACT
GCCAACTATG ACTATGGCAG AGGCAAGTTC TACTTTGCCT ACATTCACAG CAACAATGCG
ACATCGAGTG CCAGTGGGAA TGACGCAGTG GGAATCTTGA GCGCGATTAG TGTTCCGAAC
AATTATGTTC TCGGGACCAC CCCCGATGTC CAGCGATTTT ATAACGTGTT TCAGGTATCC
GTAGATTATC GAATCTCTCC CGCTTTTACC ATTGGTGCTC TCATCGGTAT GATTCGTGAC
CAAAGCGGTC AAGGGAATGA CGTGTATGGG GGAAATGTCG GATTCATCTA TAGTGTTTCA
AAGCGAACCA GCTTCTACGG TTCAGCGGGA TTAATGAAAA ACGAAAACAA TGCTGGATTC
CGGTTTAGTG GTTCCGGAGC TCCACCCAAT TTCACCGGAT CGGACATTAA TGGAAGGAAC
CTGATCGGCT TGCAGTTGGG TATTTTGCAT CTATTTTGA
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| Protein sequence | MIRKFALLML FLSFCTVCRA QSSVTLYGIL DQFVAYEHTS SGKSLVALGD GALARSRIGF
KGVEDIGGGY QIIFQLESGF NADSGALADS SRLFDRQAWV GINTPVGQFR VGRQNSAAFN
SSPEIDWSSR AMLTSIVNNF GLPGRYDDDI VYKSPRVYDF QIEAHYAMPG IAGGGLNRGA
VYQIWVDWAH GPYQAAYVGT VAVPLASAIY KEVVQYHQFT ANYDYGRGKF YFAYIHSNNA
TSSASGNDAV GILSAISVPN NYVLGTTPDV QRFYNVFQVS VDYRISPAFT IGALIGMIRD
QSGQGNDVYG GNVGFIYSVS KRTSFYGSAG LMKNENNAGF RFSGSGAPPN FTGSDINGRN
LIGLQLGILH LF
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