| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0879 |
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| Symbol | |
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| ID | 4010392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 909096 |
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| End bp | 909941 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637953486 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_556106 |
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| Protein GI | 91780899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.955974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.327323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAGG ATCATTTGAT TACTGGATCA ACCCGACTGG TGGGGATCGT TGGCTCGCCG
GTTTCGCAAG TTGCGTCGCC GGCCAACTTC AATGCGCACT TCGCCACGAC CGGCGCCGAC
ATCGCGATGA TTCCGCTGGA CATCGACGCT GAGGCCATCG ACGCCTTCAC GGTGTTGTTG
CGCGGTTGGA AGAACCTGCT CGGCTGTGTC GTGACCGTGC CGTACAAACA GACGCTGGTG
CCTCATCTGG ATGCGTTGAG CGCGCGGTCT GCCGCATTGG GTGCCGTCAA TGTCATCCGG
CGCGAAGCGG ACGGACGACT GATCGGCGAT ATGACGGACG GCGCCGGTTT TCTCGCCGCC
GCGCAGGCGC ACGGATTTCG AGCCGCAGGA CAGACGGCGT TGATCGCCGG TGCGGGCGGC
GCGGGCAGTG CGATCGCCTA TGCGCTTTGC GAAGCCCGAA TCGGACATTT GACGCTGGGC
GACATCGACC GCGCGCGCGC CGATTTGCTG GCGAAGCGGT TGGGGCAGGC ATTTCCCGAG
GTCGAAATTG ACGTCGGCCT GACCGGCGCG AGCCACGCCG ATCTGCTCGT CAATGCGACA
CCTGCCGGTA TGGACGGCAC CACGGCTTTC CCTGTGCCTG CCGGTTTGCT GAAGGCCTGT
GCGCCACACG TACTGGTGGC CGATGTCGTG ACCTCGCCAG TCATGACGCC CTTGCTGTTA
CGCGCGCAGG AACTGGGTTG CAGGATTCAG ACCGGGATTG AAATGGCTGC GGCCCAGATG
CAAGCGCTGG GCGCCTTCAT GCAAGTCATG CTGCCGGACC ACACGAGTGC GGAGCTAGCT
GGGTAA
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| Protein sequence | MHEDHLITGS TRLVGIVGSP VSQVASPANF NAHFATTGAD IAMIPLDIDA EAIDAFTVLL
RGWKNLLGCV VTVPYKQTLV PHLDALSARS AALGAVNVIR READGRLIGD MTDGAGFLAA
AQAHGFRAAG QTALIAGAGG AGSAIAYALC EARIGHLTLG DIDRARADLL AKRLGQAFPE
VEIDVGLTGA SHADLLVNAT PAGMDGTTAF PVPAGLLKAC APHVLVADVV TSPVMTPLLL
RAQELGCRIQ TGIEMAAAQM QALGAFMQVM LPDHTSAELA G
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