Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0560 |
Symbol | |
ID | 4010074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 579114 |
End bp | 579947 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637953189 |
Product | putative HpcH/HpaI aldolase |
Protein accession | YP_555809 |
Protein GI | 91780602 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00111477 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.30107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAA GTAGCCTGTT TCCCAACCAG TCCTTTCTGT TCGTTCCTGG TAATCGCCCC GAACGATTTG AAAAGGCGCT GGCGAGTGGT GCCGACGCTG TCATCATCGA TCTTGAAGAC GCGGTCCCAC CCGACGCAAA AGACGATGCA CGCAACGCTG TTGCGTCGTG GGTTTCGCCT GATCGCCCCG TTCTGGTACG CGTGAATGCC AGCGACACGC CATGGTTTGC CCAAGACGCA AGGCTGGGGC ACCTGCGCGG CATCGCCGGT ATGGTTCTGC CCAAAACCGG GTCCGCTGAT GACGTGATCA CGCTGATCGC TGGATCGCGA GCCAGAATCC CCGTTTACCC TATGATAGAA ACCGGGAAAG CGCTGTGGAA CGCACTGGAG ATAGCCAAGG CGCCGTTTGT CAAGCAATTA CTGTTCGGCA CCCTTGACTT CATCGCGGAC ATTGGCATGA GCGGTCATGG AGAAGAACTG GCTGCCTTCC GTTCGCAGTT GGCGCTCGTC TCGCGGGTTG CAGGGCTCGA ACCGCCTATA GACGGTGTTT CGCCCGATAT TGGCGATGCC GGACAGCTGA TAAAGGAAAC ACTAGCCGGA AAGCGCCTGG GTTTTGGAGG AAAGATGTGC ATCCATCCGA AGCAGGTATC GATCGTCAAC CAGTGCTATC GTCCGAGCGA CGCCGAACTG GAATGGGCCC ACACGGTACT GGAGGCTGTG GGTAACGCAA GCGGCACAGT GATCACAGTC GACGGGAAGA TGGTGGATCG CCCCGTTGTG CTTCGTGCCG AGCGTATGGT CGCCCTTGCG AGGACCCGAC GTCATGCTGG TTGA
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Protein sequence | MPKSSLFPNQ SFLFVPGNRP ERFEKALASG ADAVIIDLED AVPPDAKDDA RNAVASWVSP DRPVLVRVNA SDTPWFAQDA RLGHLRGIAG MVLPKTGSAD DVITLIAGSR ARIPVYPMIE TGKALWNALE IAKAPFVKQL LFGTLDFIAD IGMSGHGEEL AAFRSQLALV SRVAGLEPPI DGVSPDIGDA GQLIKETLAG KRLGFGGKMC IHPKQVSIVN QCYRPSDAEL EWAHTVLEAV GNASGTVITV DGKMVDRPVV LRAERMVALA RTRRHAG
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