Gene Bxe_C0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0560 
Symbol 
ID4010074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp579114 
End bp579947 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content58% 
IMG OID637953189 
Productputative HpcH/HpaI aldolase 
Protein accessionYP_555809 
Protein GI91780602 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00111477 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.30107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAA GTAGCCTGTT TCCCAACCAG TCCTTTCTGT TCGTTCCTGG TAATCGCCCC 
GAACGATTTG AAAAGGCGCT GGCGAGTGGT GCCGACGCTG TCATCATCGA TCTTGAAGAC
GCGGTCCCAC CCGACGCAAA AGACGATGCA CGCAACGCTG TTGCGTCGTG GGTTTCGCCT
GATCGCCCCG TTCTGGTACG CGTGAATGCC AGCGACACGC CATGGTTTGC CCAAGACGCA
AGGCTGGGGC ACCTGCGCGG CATCGCCGGT ATGGTTCTGC CCAAAACCGG GTCCGCTGAT
GACGTGATCA CGCTGATCGC TGGATCGCGA GCCAGAATCC CCGTTTACCC TATGATAGAA
ACCGGGAAAG CGCTGTGGAA CGCACTGGAG ATAGCCAAGG CGCCGTTTGT CAAGCAATTA
CTGTTCGGCA CCCTTGACTT CATCGCGGAC ATTGGCATGA GCGGTCATGG AGAAGAACTG
GCTGCCTTCC GTTCGCAGTT GGCGCTCGTC TCGCGGGTTG CAGGGCTCGA ACCGCCTATA
GACGGTGTTT CGCCCGATAT TGGCGATGCC GGACAGCTGA TAAAGGAAAC ACTAGCCGGA
AAGCGCCTGG GTTTTGGAGG AAAGATGTGC ATCCATCCGA AGCAGGTATC GATCGTCAAC
CAGTGCTATC GTCCGAGCGA CGCCGAACTG GAATGGGCCC ACACGGTACT GGAGGCTGTG
GGTAACGCAA GCGGCACAGT GATCACAGTC GACGGGAAGA TGGTGGATCG CCCCGTTGTG
CTTCGTGCCG AGCGTATGGT CGCCCTTGCG AGGACCCGAC GTCATGCTGG TTGA
 
Protein sequence
MPKSSLFPNQ SFLFVPGNRP ERFEKALASG ADAVIIDLED AVPPDAKDDA RNAVASWVSP 
DRPVLVRVNA SDTPWFAQDA RLGHLRGIAG MVLPKTGSAD DVITLIAGSR ARIPVYPMIE
TGKALWNALE IAKAPFVKQL LFGTLDFIAD IGMSGHGEEL AAFRSQLALV SRVAGLEPPI
DGVSPDIGDA GQLIKETLAG KRLGFGGKMC IHPKQVSIVN QCYRPSDAEL EWAHTVLEAV
GNASGTVITV DGKMVDRPVV LRAERMVALA RTRRHAG