Gene Bxe_C0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0559 
Symbol 
ID4010073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp577952 
End bp579010 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content57% 
IMG OID637953188 
ProductLysR family transcriptional regulator 
Protein accessionYP_555808 
Protein GI91780601 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0351204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.326115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCA CGCTTCCCGA TCGTAAACAA AATCCGCCAT CCGCCCCTGC AGCGACGGTA 
AGCCTCAGGC TGCTGGAAAT TTTCATGCTT GTCGCACAGG AAGGCTCGGT GAGCGCCGCA
GCCAATCGTC TCAATCTTAC TCAAGCAGCG GTTTCGCAGG CAATCACGGT GCTGGAGCAG
GCGCTGGACG TCAAGCTGCT TGACCGCTCG GTCCGTCCAC CTCTGCTGAC TTTACGCGGG
AGTACCGCAC TACAATACGC CCGGGAGATA CTGGCGAAGG TGCACGAATT CGAAGATGCG
ATGCGCTATA GCGGGTCGGG TCGCGTGCCA CTGCTGCGAA TAGGAATGCT CAACAGCTTT
GCCTCCACCG CGGGAGCATT CGTGCTGAAC CAATTGCGCG ACATCGCCGC TGAGTGGACG
GTCGCTTCCG GGTTCCGGGA GACGTGCATA CAAGCTCTGC TGGACCGGCA ATCGGACGTA
ATCATTACCA CGGACGAAAC TCCCGCTCCC AGCGAAATCG AGGTTTTTCC TATTTTTTCG
GAGCCTTTCG TGGCAGTGGT TCCTGCCTCC TTTGATGGAA AAACTGAACG CCTACAGGAT
ATCGCAGACA AGCTCGACTT CATTCATTAC GGCCATGACA GTCATATGGG CTCCAAAATA
ACGAACTACC TTAAAAAAAT CGGTACCGTG CCTGCCAGGC GCTACCAGTT CGACACCACC
GATGCCGCGT TGCATATGGT CGCCGGCGGT TTTGGATGGG CCATCGTCAC ACCGCTCATC
TATCTGAAGT CCCGCGTGGA AGGAAGCGGG GTCCGCGTTG TGCCCTTGAC CAGATTGCCA
ATTCATCGCA CTTTCATTGT GGGCATGCGG CGGGGAGAAG GGTCTGATAT CGCCCAGCGC
GTCCGTACAG CAGCTATTAT TACCTTGCGC GACGTCATAT TGCCGCAGAT CGAGGCGGTG
TTACCCGAAG CCAGTAAGGG CGTCTCCGTT GCCGAGATTG AGCCGAAAGC GTCTACAGGC
AAACGCAAGG GATCCCGACG CGATTCTGCC GGATCGTAA
 
Protein sequence
MTPTLPDRKQ NPPSAPAATV SLRLLEIFML VAQEGSVSAA ANRLNLTQAA VSQAITVLEQ 
ALDVKLLDRS VRPPLLTLRG STALQYAREI LAKVHEFEDA MRYSGSGRVP LLRIGMLNSF
ASTAGAFVLN QLRDIAAEWT VASGFRETCI QALLDRQSDV IITTDETPAP SEIEVFPIFS
EPFVAVVPAS FDGKTERLQD IADKLDFIHY GHDSHMGSKI TNYLKKIGTV PARRYQFDTT
DAALHMVAGG FGWAIVTPLI YLKSRVEGSG VRVVPLTRLP IHRTFIVGMR RGEGSDIAQR
VRTAAIITLR DVILPQIEAV LPEASKGVSV AEIEPKASTG KRKGSRRDSA GS