| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0500 |
|---|
| Symbol | |
|---|
| ID | 4010014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 515785 |
|---|
| End bp | 516729 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637953131 |
|---|
| Product | branched chain amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_555751 |
|---|
| Protein GI | 91780544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0771469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC GTTACACGGG CTTAATTGTT GTCGCCGTCG GGCTGATCGC CATTGGCTTT
CAGTATCTGA GAGGTGACGG TGGTGCGGCA TTCCTGGTGG GATTAATGTT GGTCTGGGCG
ATTGCGGCAC TGGGTTATGA CCTGGTGTTT GGCCTGAGCG GTTTGCTGTC GTTCGGACAT
GCTGCATTCC TTGGCTCTGG TGCCTATGCA GTCGCGATTC TGACTACCCA ATGGATGCTG
CCTTTCCCGG TTGCCCTTTT TATTTCCGCA GTCCTGGGAG CCTTGCTTGC GCTCGTCTTT
GGTGCTGCGG CGTTGCGGGC TAGCGGAATT TATTGCGGGT TGCTCACGCT TGCGTTGGCG
CAGCTCACAA ATATTCTTCT CACCGTGCGG CTTCAGGGAT TGACGGGAGG TGACGATGGA
ATTTCCGGCG TGAGCAGGCC GATTAAATAC CTGCAATTCC TGACGGACGA TCTCAATTAT
GTCGTGTACG TTGGGTGCAT TTTTCTTGGT GCATTGGCTT TATCTGCCTT GTTACGGCTA
TCCCCGTTTG GACAGGTTTT GCGAGCGGCA AGTCAGAACG AGGTGAGAGC GGAACAACTC
GGGTGGAATG TTCGGCGATA CAGATTGGCG ATCTTTGCCG TGTCTGGCGC TTATACGGGG
ATAGCAGGGG GACTGATCGC CGGTCTGACG CAATTTGCCG GACCTCAACT CATGCAGTGG
AGCAACTCGG GTGACCTCAT CATAATGACC CTTTTGGGAG GCCGCGATTC ACTCCTGGGT
CCGGTAGTAG GTGTAGTTTT GACGATTCTG CTCCGTGAGG TGGTTGGTTC ATACACCGAG
CATTGGGCAG GCATCCTGGG CGTCGTTTTC GTTCTCTGTA CGCTATATAT GCCCGTCGGC
GTCATCGGGC TCTGGAGAAA TTTTCGTGGA AAAGGCGCTA CATGA
|
|---|
| Protein sequence | MKIRYTGLIV VAVGLIAIGF QYLRGDGGAA FLVGLMLVWA IAALGYDLVF GLSGLLSFGH
AAFLGSGAYA VAILTTQWML PFPVALFISA VLGALLALVF GAAALRASGI YCGLLTLALA
QLTNILLTVR LQGLTGGDDG ISGVSRPIKY LQFLTDDLNY VVYVGCIFLG ALALSALLRL
SPFGQVLRAA SQNEVRAEQL GWNVRRYRLA IFAVSGAYTG IAGGLIAGLT QFAGPQLMQW
SNSGDLIIMT LLGGRDSLLG PVVGVVLTIL LREVVGSYTE HWAGILGVVF VLCTLYMPVG
VIGLWRNFRG KGAT
|
|---|
| |