| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0452 |
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| Symbol | |
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| ID | 4009966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 472531 |
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| End bp | 473238 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637953086 |
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| Product | putative type IV secretion system protein VirB5/TraF |
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| Protein accession | YP_555706 |
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| Protein GI | 91780499 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.385252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT CAGGTGTACG CCGCACTCTC GTAGCCATTG CGGCAGCAAC GACCAGCAGC
CTGTCTTCCG GCGTCCATGC ACAGGGCATT CCAGTCTACG ACGCGCAGAA CGTCATACAG
GCGATCGCGA CTGTCGGTCA ACTGAAACAG GAAGTGCAGC AGGAACTTCA GCTGTATCAG
TCGCTCAGCG GCACGCGCGG GTTTGGCGAG CTGATGAGCA ATCCGGTCCT GTCGAATTCA
CTGCCGTCGA ACTGGCAGTC GGTGTACACA GCGATCCAGC ACGGCGGGTA TGCGGGCCTG
ACGGGCAGCG CGCAGACGCT GCGCTCGGCG AGCGAAATCT ACAACTGCGA GGACCAGAGC
GGCATTGACC AGCAGGTCTG CCAGCGCGCG CTGAACAAGC CGTTTCAGGA CAAGGCCTTC
GGCACACAGG CGTACCAGAC GGAACTCGAT GAACTCGACC AGATCCAGGG CCTGATGCAA
CAGATCGATG TGACGCAGGA CCAGAAAGGC ATCGGGGAAC TGCAGGCGCG CATCCAGATT
GAGAGCACGG CGGTCGGCAA TGAAATGACG AAGCTGCAGC TTTTCAGGAT GCTCGCAGAT
TCGGAGGACC GGCTGATTGC CGAGCAGCAG CAGGAGCTTG TGCTCAAGCG CGCCGGAAAT
ACCGCACGGC TGCAGGACCA GATGGTGCCT GCGGGCTTTG GCAACTGA
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| Protein sequence | MIASGVRRTL VAIAAATTSS LSSGVHAQGI PVYDAQNVIQ AIATVGQLKQ EVQQELQLYQ
SLSGTRGFGE LMSNPVLSNS LPSNWQSVYT AIQHGGYAGL TGSAQTLRSA SEIYNCEDQS
GIDQQVCQRA LNKPFQDKAF GTQAYQTELD ELDQIQGLMQ QIDVTQDQKG IGELQARIQI
ESTAVGNEMT KLQLFRMLAD SEDRLIAEQQ QELVLKRAGN TARLQDQMVP AGFGN
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