Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0452 |
Symbol | |
ID | 4009966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 472531 |
End bp | 473238 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637953086 |
Product | putative type IV secretion system protein VirB5/TraF |
Protein accession | YP_555706 |
Protein GI | 91780499 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.385252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCTT CAGGTGTACG CCGCACTCTC GTAGCCATTG CGGCAGCAAC GACCAGCAGC CTGTCTTCCG GCGTCCATGC ACAGGGCATT CCAGTCTACG ACGCGCAGAA CGTCATACAG GCGATCGCGA CTGTCGGTCA ACTGAAACAG GAAGTGCAGC AGGAACTTCA GCTGTATCAG TCGCTCAGCG GCACGCGCGG GTTTGGCGAG CTGATGAGCA ATCCGGTCCT GTCGAATTCA CTGCCGTCGA ACTGGCAGTC GGTGTACACA GCGATCCAGC ACGGCGGGTA TGCGGGCCTG ACGGGCAGCG CGCAGACGCT GCGCTCGGCG AGCGAAATCT ACAACTGCGA GGACCAGAGC GGCATTGACC AGCAGGTCTG CCAGCGCGCG CTGAACAAGC CGTTTCAGGA CAAGGCCTTC GGCACACAGG CGTACCAGAC GGAACTCGAT GAACTCGACC AGATCCAGGG CCTGATGCAA CAGATCGATG TGACGCAGGA CCAGAAAGGC ATCGGGGAAC TGCAGGCGCG CATCCAGATT GAGAGCACGG CGGTCGGCAA TGAAATGACG AAGCTGCAGC TTTTCAGGAT GCTCGCAGAT TCGGAGGACC GGCTGATTGC CGAGCAGCAG CAGGAGCTTG TGCTCAAGCG CGCCGGAAAT ACCGCACGGC TGCAGGACCA GATGGTGCCT GCGGGCTTTG GCAACTGA
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Protein sequence | MIASGVRRTL VAIAAATTSS LSSGVHAQGI PVYDAQNVIQ AIATVGQLKQ EVQQELQLYQ SLSGTRGFGE LMSNPVLSNS LPSNWQSVYT AIQHGGYAGL TGSAQTLRSA SEIYNCEDQS GIDQQVCQRA LNKPFQDKAF GTQAYQTELD ELDQIQGLMQ QIDVTQDQKG IGELQARIQI ESTAVGNEMT KLQLFRMLAD SEDRLIAEQQ QELVLKRAGN TARLQDQMVP AGFGN
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