| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0416 |
|---|
| Symbol | |
|---|
| ID | 4009930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 439389 |
|---|
| End bp | 440177 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637953050 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_555670 |
|---|
| Protein GI | 91780463 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCTA TCTCTCGACG CCGTTCGAAC GAGGGCCCGC ACCGGCCATC GACCGTCTCT
GATCGCCAGC AGGCTGGCGC GCCGGCACCG CTCAAGCGTC TTGCATGTGC CACCGATATC
CCTTCTCTCG TTGAGTCGTT CGGCCATGCG GCTGGCAAAC TCGGCTTCCC CCATTACGTG
ATCAGCCGCG TTACGCGCAG CCGCTCGACC CGCGCACCGC AAACGGCACT CGAAATGATC
GGTTCGCACT ATCCGAAGGA GTGGGTGCAG CACTACCAGC GGCGGGACTA CGCGTTAACC
GATCCTGTTC ATCGGGCGGC GTTCTTCCAG TCGGCGCCCT ACCGTTGGCA CGACATCATC
GACCTCACCA AAGCCGACCA CCGGTTTCTT GGCGAAGCAA GCGAGGCAGG ACTACCCGCG
GGACTCAGCA TCCCGGTCCA CCAGTCCGAT GGCAGTGTCC TGCTGTTCAA CCTGGCGGGG
CCTCTACATT CCGTCAACAG CGAAATCAAC GCCCGGCGGG CATGCCTGAT GAGCGCGCAG
TTTAACTTCG AACTGCACCG CCTCGGGCTG ATACATTCAA GAAGAGCCGC ACGCCTGCTT
ACACCTTGCC AGATCGTATG CCTCACCTGG GTCGCCCGCG GAAAAACCTC GGCCGAGATC
GGCGAAATTC TCGGATGCTC TCACTATACC GTTGACTACC ACGTCAAGAA AGCGATGGAG
GCACTCAACA TCTGGGGCAG GACGGCTGCG GCCGTTCAGG CGACGGTACA GGGCCTCATA
AAACCCTGA
|
|---|
| Protein sequence | MTPISRRRSN EGPHRPSTVS DRQQAGAPAP LKRLACATDI PSLVESFGHA AGKLGFPHYV
ISRVTRSRST RAPQTALEMI GSHYPKEWVQ HYQRRDYALT DPVHRAAFFQ SAPYRWHDII
DLTKADHRFL GEASEAGLPA GLSIPVHQSD GSVLLFNLAG PLHSVNSEIN ARRACLMSAQ
FNFELHRLGL IHSRRAARLL TPCQIVCLTW VARGKTSAEI GEILGCSHYT VDYHVKKAME
ALNIWGRTAA AVQATVQGLI KP
|
|---|
| |