Gene Bxe_C0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0396 
Symbol 
ID4009910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp419558 
End bp421366 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content64% 
IMG OID637953033 
Productpolar amino acid ABC transporter inner membrane protein 
Protein accessionYP_555653 
Protein GI91780446 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCAGCCAGCG GCTTGCCGGT TCCACCCGCG CGGGCCACCT GAACGAAGAC 
GCGGCAGATC GCGAATACGC ACACTATCGG ATCGTTCCGG CAAGACATCA TGCGCGCACA
GCCGGAACGG TGCTGGCCAT CGTGCTGATC GGTGTCGTAC TGAATTCGGT ACTGGGTAAT
CCGCGCTGGG GCTGGGGCGT CTTTGCAGAG TGGTTTTTCG CCGGGCCGGT GCTCTCTGGC
CTTGGTCGGA CGCTCGTGCT CACGGCGCTC AGCGCGCTCT TTGGCTTTGC GTTTGCGATC
CCGCTTGCTC TCGCGCGTGT ATCCCGTTCG CCGTTGCTGA CTGGCTGTGC GTGGGCGTTC
ATCTGGCTGT TTCGCTCGAT CCCGCCGATC GTGCTGCTGC TTCTGCTGAA CAACCTCGGC
TATCTGTACG AGACGATCTG GATCGGTGTG CCGTTCACGC ACATCACACT GCTGGATGAA
TCGACCACCA ACCTGATCAG TCCATTCTTC GCTGCGGTGC TCGGGCTCAC GCTGAACGCT
GCGGCGTTTT CGGCAGAGGC GATCCGCGGG GGGATCCTGT CCGTCGATCA GGGGCAACGT
GAAGCGGCCG CCGCACTCGG CTTGCCGGGC GGCCGTCAGG TGCGGCGCAT CGTGCTGCCG
CAGGCGATGC GCGCGATTCT GCCGACCGCG TTCAACGACG TAATTGGCTT GGCGAAAGGC
ACCTCGGTCG TCTACATCCT CGCGATGCCA GACCTGTTCT ACACGGTGCA GATCATCTAT
CACCGCAACC TTGAGGTTAT CCCGCTGTTG ATGGTCGCAA CCGTCTGGTA TCTGGTCATC
CTGACCGCGC TGTCGGCAAT CCAGGTTCAT ATCGAACGGT ACTACGCCCG CGGCGCGACG
CGCGAGCCGG TGGTGAACTC GCCGCTGACC GCGCTGTTCG GGCGGTGGGG TGGCGCACGC
GCCGCACGGA GAGAAGGAAT TGCACCGCCA GCAGGGCAGG ATCGTTCTGC AGCTGAAGCG
GGCACGGCGG GCTGGGCGCA ACTGCGTGTT GGCGGCAAGG TGGGTATCCA TAACGTGTCG
AAGAGCTTCG GTACGCTGAA GGTGCTCGAC GACGTCTCGC TGGCGTTTCC ATCGGGAAGC
GTCACTGTGA TCCTCGGCCA ATCGGGCTCG GGCAAGTCGA CCCTGCTGCG CTCGATCAAT
CACCTTGAAC GCGTCGACGA TGGCTTCATC GACATTGATG GCGAACTGGT CGGGTATCGC
CGGGAAGGGC GCACGCTCTA CGAGCTCAAG GAAAAGGACA TTCTGGAGCG GCGCCGCGCT
GACGTTGGGA TGGTGTTCCA GAGCTTCAAC CTGTTCCCGC ACCTGACTGT GCTCGAGAAC
GTCGTCGAGG CACCGCTGGC GGCCGGTGTG CCGCGCGCTC GGGCCGAGGC GGAAGCGCGC
ACGCTACTCG CGCGCGTGGG ACTCACCGGC AAGGCTGACG CGTGGCCGCG CCAGCTATCT
GGAGGCCAGC AGCAGCGCGT GGCGATCGCT CGCGCGCTTG CGCTAAAGCC GAAGGTTCTT
CTATTTGACG AGCCGACGTC GGCACTCGAT CCGGAGCTCG TCAACGAGGT GCTCGATGTG
ATTCGCCAGC TTGCGCGTTC CGGCACGACG CTGATCATTG TCACGCACGA GATCGGGTTC
GCGCGCGAGG TCGCCGACAC GATCGTATTC ATGGACGGCG GACGCATCAT AGAATCCGGT
CCACCGGCCC GAGTGCTTGG CAATCCGGCT CACCCTCGCA CCCGCGAATT TCTTTCCAAG
GTGCTGTAG
 
Protein sequence
MSDTSQRLAG STRAGHLNED AADREYAHYR IVPARHHART AGTVLAIVLI GVVLNSVLGN 
PRWGWGVFAE WFFAGPVLSG LGRTLVLTAL SALFGFAFAI PLALARVSRS PLLTGCAWAF
IWLFRSIPPI VLLLLLNNLG YLYETIWIGV PFTHITLLDE STTNLISPFF AAVLGLTLNA
AAFSAEAIRG GILSVDQGQR EAAAALGLPG GRQVRRIVLP QAMRAILPTA FNDVIGLAKG
TSVVYILAMP DLFYTVQIIY HRNLEVIPLL MVATVWYLVI LTALSAIQVH IERYYARGAT
REPVVNSPLT ALFGRWGGAR AARREGIAPP AGQDRSAAEA GTAGWAQLRV GGKVGIHNVS
KSFGTLKVLD DVSLAFPSGS VTVILGQSGS GKSTLLRSIN HLERVDDGFI DIDGELVGYR
REGRTLYELK EKDILERRRA DVGMVFQSFN LFPHLTVLEN VVEAPLAAGV PRARAEAEAR
TLLARVGLTG KADAWPRQLS GGQQQRVAIA RALALKPKVL LFDEPTSALD PELVNEVLDV
IRQLARSGTT LIIVTHEIGF AREVADTIVF MDGGRIIESG PPARVLGNPA HPRTREFLSK
VL