Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0396 |
Symbol | |
ID | 4009910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 419558 |
End bp | 421366 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637953033 |
Product | polar amino acid ABC transporter inner membrane protein |
Protein accession | YP_555653 |
Protein GI | 91780446 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCAGCCAGCG GCTTGCCGGT TCCACCCGCG CGGGCCACCT GAACGAAGAC GCGGCAGATC GCGAATACGC ACACTATCGG ATCGTTCCGG CAAGACATCA TGCGCGCACA GCCGGAACGG TGCTGGCCAT CGTGCTGATC GGTGTCGTAC TGAATTCGGT ACTGGGTAAT CCGCGCTGGG GCTGGGGCGT CTTTGCAGAG TGGTTTTTCG CCGGGCCGGT GCTCTCTGGC CTTGGTCGGA CGCTCGTGCT CACGGCGCTC AGCGCGCTCT TTGGCTTTGC GTTTGCGATC CCGCTTGCTC TCGCGCGTGT ATCCCGTTCG CCGTTGCTGA CTGGCTGTGC GTGGGCGTTC ATCTGGCTGT TTCGCTCGAT CCCGCCGATC GTGCTGCTGC TTCTGCTGAA CAACCTCGGC TATCTGTACG AGACGATCTG GATCGGTGTG CCGTTCACGC ACATCACACT GCTGGATGAA TCGACCACCA ACCTGATCAG TCCATTCTTC GCTGCGGTGC TCGGGCTCAC GCTGAACGCT GCGGCGTTTT CGGCAGAGGC GATCCGCGGG GGGATCCTGT CCGTCGATCA GGGGCAACGT GAAGCGGCCG CCGCACTCGG CTTGCCGGGC GGCCGTCAGG TGCGGCGCAT CGTGCTGCCG CAGGCGATGC GCGCGATTCT GCCGACCGCG TTCAACGACG TAATTGGCTT GGCGAAAGGC ACCTCGGTCG TCTACATCCT CGCGATGCCA GACCTGTTCT ACACGGTGCA GATCATCTAT CACCGCAACC TTGAGGTTAT CCCGCTGTTG ATGGTCGCAA CCGTCTGGTA TCTGGTCATC CTGACCGCGC TGTCGGCAAT CCAGGTTCAT ATCGAACGGT ACTACGCCCG CGGCGCGACG CGCGAGCCGG TGGTGAACTC GCCGCTGACC GCGCTGTTCG GGCGGTGGGG TGGCGCACGC GCCGCACGGA GAGAAGGAAT TGCACCGCCA GCAGGGCAGG ATCGTTCTGC AGCTGAAGCG GGCACGGCGG GCTGGGCGCA ACTGCGTGTT GGCGGCAAGG TGGGTATCCA TAACGTGTCG AAGAGCTTCG GTACGCTGAA GGTGCTCGAC GACGTCTCGC TGGCGTTTCC ATCGGGAAGC GTCACTGTGA TCCTCGGCCA ATCGGGCTCG GGCAAGTCGA CCCTGCTGCG CTCGATCAAT CACCTTGAAC GCGTCGACGA TGGCTTCATC GACATTGATG GCGAACTGGT CGGGTATCGC CGGGAAGGGC GCACGCTCTA CGAGCTCAAG GAAAAGGACA TTCTGGAGCG GCGCCGCGCT GACGTTGGGA TGGTGTTCCA GAGCTTCAAC CTGTTCCCGC ACCTGACTGT GCTCGAGAAC GTCGTCGAGG CACCGCTGGC GGCCGGTGTG CCGCGCGCTC GGGCCGAGGC GGAAGCGCGC ACGCTACTCG CGCGCGTGGG ACTCACCGGC AAGGCTGACG CGTGGCCGCG CCAGCTATCT GGAGGCCAGC AGCAGCGCGT GGCGATCGCT CGCGCGCTTG CGCTAAAGCC GAAGGTTCTT CTATTTGACG AGCCGACGTC GGCACTCGAT CCGGAGCTCG TCAACGAGGT GCTCGATGTG ATTCGCCAGC TTGCGCGTTC CGGCACGACG CTGATCATTG TCACGCACGA GATCGGGTTC GCGCGCGAGG TCGCCGACAC GATCGTATTC ATGGACGGCG GACGCATCAT AGAATCCGGT CCACCGGCCC GAGTGCTTGG CAATCCGGCT CACCCTCGCA CCCGCGAATT TCTTTCCAAG GTGCTGTAG
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Protein sequence | MSDTSQRLAG STRAGHLNED AADREYAHYR IVPARHHART AGTVLAIVLI GVVLNSVLGN PRWGWGVFAE WFFAGPVLSG LGRTLVLTAL SALFGFAFAI PLALARVSRS PLLTGCAWAF IWLFRSIPPI VLLLLLNNLG YLYETIWIGV PFTHITLLDE STTNLISPFF AAVLGLTLNA AAFSAEAIRG GILSVDQGQR EAAAALGLPG GRQVRRIVLP QAMRAILPTA FNDVIGLAKG TSVVYILAMP DLFYTVQIIY HRNLEVIPLL MVATVWYLVI LTALSAIQVH IERYYARGAT REPVVNSPLT ALFGRWGGAR AARREGIAPP AGQDRSAAEA GTAGWAQLRV GGKVGIHNVS KSFGTLKVLD DVSLAFPSGS VTVILGQSGS GKSTLLRSIN HLERVDDGFI DIDGELVGYR REGRTLYELK EKDILERRRA DVGMVFQSFN LFPHLTVLEN VVEAPLAAGV PRARAEAEAR TLLARVGLTG KADAWPRQLS GGQQQRVAIA RALALKPKVL LFDEPTSALD PELVNEVLDV IRQLARSGTT LIIVTHEIGF AREVADTIVF MDGGRIIESG PPARVLGNPA HPRTREFLSK VL
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