Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0342 |
Symbol | |
ID | 4009856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 373357 |
End bp | 374088 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637952985 |
Product | GntR family transcriptional regulator |
Protein accession | YP_555605 |
Protein GI | 91780398 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0407848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000377769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTGA TCCGCGAGAA TGCCACATCA CTGTACGATC AGATTGCCGC CACACTGCGC GACGAGATCG AACGGGGTGG CTATGAGCCT TCGGGGAAAT TGCCGTCCGA AGCTGAGCTA AGCGAGCGCT TCGGCGTGAG TCGCGTGACA GTTCGGCTCG CGATTGGAAA GCTGGTTAGC GACAGCCTTG TCGAGCGCAA ACAGGGTAAA GGCACGTTTG CAACAGGTAA GCGCTTTCGG CATCGGCTCG ACGCGCTGCA TGGGTTTTAC GATTCTCTGG CTCGTCAGGG CGTCCATCCG CAGATGAAGC TCTTGCGGAT GGACCAGGCA AAAAAGCTGC CGCCAGCGAT GCACGGCGTT TTCGCGCCTT CCATCAAGAC GGCCGTCTAT CTGGAACGCC TTCATTCTGT GGACGACGAC GTGGTCGCAC TCGCGCAAAC CTGGCTGTTG CCCGAAGCCG GGGAGATTTC TGAACGGCTG GCGCAGACAA GGCCGACCTA CGAAATCCTG GAGTCGTTGC CTGGATGGCG TCTTGCCCGT GCTGACATGA GCATTACTGC GGTTCCGGCG TCTGGGGCTA TTGCTATTCA ACTGCAGGTT ACGGAGCACA CCCCACTACT CGTAATGAAA CGCACCTCGC GGTTAAGCGA TGGCCGGGTT TGCGAAGCCA CGCTATTCCA TATCAGGCCT GAGCGCTATG AGTTCACGGT AAGTAGCGTC ACGCATGCTT GA
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Protein sequence | MSLIRENATS LYDQIAATLR DEIERGGYEP SGKLPSEAEL SERFGVSRVT VRLAIGKLVS DSLVERKQGK GTFATGKRFR HRLDALHGFY DSLARQGVHP QMKLLRMDQA KKLPPAMHGV FAPSIKTAVY LERLHSVDDD VVALAQTWLL PEAGEISERL AQTRPTYEIL ESLPGWRLAR ADMSITAVPA SGAIAIQLQV TEHTPLLVMK RTSRLSDGRV CEATLFHIRP ERYEFTVSSV THA
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