Gene Bxe_C0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0342 
Symbol 
ID4009856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp373357 
End bp374088 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID637952985 
ProductGntR family transcriptional regulator 
Protein accessionYP_555605 
Protein GI91780398 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0407848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000377769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTGA TCCGCGAGAA TGCCACATCA CTGTACGATC AGATTGCCGC CACACTGCGC 
GACGAGATCG AACGGGGTGG CTATGAGCCT TCGGGGAAAT TGCCGTCCGA AGCTGAGCTA
AGCGAGCGCT TCGGCGTGAG TCGCGTGACA GTTCGGCTCG CGATTGGAAA GCTGGTTAGC
GACAGCCTTG TCGAGCGCAA ACAGGGTAAA GGCACGTTTG CAACAGGTAA GCGCTTTCGG
CATCGGCTCG ACGCGCTGCA TGGGTTTTAC GATTCTCTGG CTCGTCAGGG CGTCCATCCG
CAGATGAAGC TCTTGCGGAT GGACCAGGCA AAAAAGCTGC CGCCAGCGAT GCACGGCGTT
TTCGCGCCTT CCATCAAGAC GGCCGTCTAT CTGGAACGCC TTCATTCTGT GGACGACGAC
GTGGTCGCAC TCGCGCAAAC CTGGCTGTTG CCCGAAGCCG GGGAGATTTC TGAACGGCTG
GCGCAGACAA GGCCGACCTA CGAAATCCTG GAGTCGTTGC CTGGATGGCG TCTTGCCCGT
GCTGACATGA GCATTACTGC GGTTCCGGCG TCTGGGGCTA TTGCTATTCA ACTGCAGGTT
ACGGAGCACA CCCCACTACT CGTAATGAAA CGCACCTCGC GGTTAAGCGA TGGCCGGGTT
TGCGAAGCCA CGCTATTCCA TATCAGGCCT GAGCGCTATG AGTTCACGGT AAGTAGCGTC
ACGCATGCTT GA
 
Protein sequence
MSLIRENATS LYDQIAATLR DEIERGGYEP SGKLPSEAEL SERFGVSRVT VRLAIGKLVS 
DSLVERKQGK GTFATGKRFR HRLDALHGFY DSLARQGVHP QMKLLRMDQA KKLPPAMHGV
FAPSIKTAVY LERLHSVDDD VVALAQTWLL PEAGEISERL AQTRPTYEIL ESLPGWRLAR
ADMSITAVPA SGAIAIQLQV TEHTPLLVMK RTSRLSDGRV CEATLFHIRP ERYEFTVSSV
THA