Gene Bxe_C0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0298 
Symbol 
ID4009669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp326011 
End bp327357 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content52% 
IMG OID637952951 
Productmajor facilitator superfamily metabolite/H(+) symporter 
Protein accessionYP_555571 
Protein GI91780364 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG AAAGTACTGC CTTGACGGTA GAAGGAACGT CAGGCGCAAT GAATGATTCT 
GCGTTGCTAA TGAAGACGCT TAGAGCGAAG TCAATGGTTG CAGCCGGCGT TGGAAATACA
TTGGAATGGT TCGACTGGAC TATGTATGCT ACTTTTTCTC CTTACATCGC CGGCGCGTTC
TTCGCTAAAT CGGACCCCCG TTCGATGCTG CTAAGTGCCT TGGCAGTCTT CGCGGTTGGC
TTTCTTTCGC GTCCGCTCGG AGGTATCGTT TTTGGCGTTC TGACCGACAA GCTCGGACGA
AAAGGTACTT TGGTGACAAC CGTACTCATT ATGAGCGCGG CAAGCCTAAC GATAGGCTTG
ATGCCAACCT ATGCTTCGAT CGGGGCTTGG TCGTCGTTAC TACTTCTCAT CGTCCGGCTT
CTACAAGGTT TCGCACACGG CGGAGAGATG ACCGCTTCGT ACGCGTATCT GGCAGAGATT
GCGCCAGCTC CGAGGCGCGC GTTCTGGTCT AGTAGCATGT ATGTTTGCGC TGGTCTTGGC
GGGTTGATCG CGACTATCCT TGCTACGGTT CTGACCAACT ATCTAACGAA GGATGTGATG
CAAGCTTGGG GTTGGCGTGT ACCGTTTATT GTTGGCGCGG TATTGTCCAT TGCAATTATC
TTCATGCGTC GTGGGATGAT GGAGAGCGAC GTGTATGAGA AAGATCGGGA AGAAAGTCGG
GGCACAAAAT CTATTGAAGT AAGAAACAGA TGGAGTCGTC GTAAAATCAT TGCCCGTACG
TGCGGAATGT TCATCTATGA GGCGTCGGCC ACACTTCCAT ACTACGTGTG GACATCCTAC
CCCGCCGTTT TCGCGATTAC GTACCGAGGG ATGGCGCCTG GCAGCGCGTT CGCAGCCAGT
CTGGGGGCGC AGATTATTAA CATTATCTGT ACGCCGGTTG CGGGATGGAT CTCGGATCAT
GTCGGACGCA AGCCGCTCAC AATTTTCTAT TATCTGGCGA ACGCCATTTT TATTTTTCCG
TTGCTTGGTT TCATCAATGA CGACCCATGG AGACTTTTTG CTGCCCAGTC ATGCATGCTT
GCGGTCAGTG CGTGCATAGG CGGAACACAG TCCGCAATCG CTTCCGAACA AATTCCCACG
GCTTACCGGG CACGAGTTCT AGGGACGGCT TTCCCGATCG CGACAGCAAT GTTTGGCGGG
ACGACTCCCT ACCTCACCAG CCTGTTTTAC GGTCGCGGTC AAGGCTGGAT TTTTAACATG
TATTTGATTG TGGTCTGCCT TATCGGCGCC ATTGTAGTTG CTCGGTGGAA GGAGACCAAG
GGCATCGACC TTCATCGCGT CGAATAG
 
Protein sequence
MAKESTALTV EGTSGAMNDS ALLMKTLRAK SMVAAGVGNT LEWFDWTMYA TFSPYIAGAF 
FAKSDPRSML LSALAVFAVG FLSRPLGGIV FGVLTDKLGR KGTLVTTVLI MSAASLTIGL
MPTYASIGAW SSLLLLIVRL LQGFAHGGEM TASYAYLAEI APAPRRAFWS SSMYVCAGLG
GLIATILATV LTNYLTKDVM QAWGWRVPFI VGAVLSIAII FMRRGMMESD VYEKDREESR
GTKSIEVRNR WSRRKIIART CGMFIYEASA TLPYYVWTSY PAVFAITYRG MAPGSAFAAS
LGAQIINIIC TPVAGWISDH VGRKPLTIFY YLANAIFIFP LLGFINDDPW RLFAAQSCML
AVSACIGGTQ SAIASEQIPT AYRARVLGTA FPIATAMFGG TTPYLTSLFY GRGQGWIFNM
YLIVVCLIGA IVVARWKETK GIDLHRVE