Gene Bxe_C0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0225 
Symbol 
ID4009558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp245157 
End bp245567 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content60% 
IMG OID637952879 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_555499 
Protein GI91780292 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.798627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCT CGACAGGTAA CAACGACGAC CAGGTGCTCA GCGAAATCAA TATCACGCCG 
CTGGTCGACG TGATGCTCGT TTTGCTGGTT GCTTTCATTC TGACAGCGCC CTTGCTCAAC
AACGCGATCC ATGTCAACTT GCCGAAGACC GCACGCACCG CTGCGCTCGA CGATAAGCGT
CCGCTGACGA TCAGCATCGA CGATCACGGC AAGGTATTTT TCGACAAACG CGAGGTGCCG
GCGGACACGG TGGAGACGGA ATTGCGCGCG CAGCGTAGCC ATAACGCCGA ACTCGCGGTC
GTGTTGCAGG GCGATACCAA AGTGCCCTAT GGCAGCGTCG CCAGGGTCAT GGCGGCGATC
GAACGCGCCG GCATCAGCCG CGTCTCGGTG GTGACGGACT CGCACCCGTG A
 
Protein sequence
MAFSTGNNDD QVLSEINITP LVDVMLVLLV AFILTAPLLN NAIHVNLPKT ARTAALDDKR 
PLTISIDDHG KVFFDKREVP ADTVETELRA QRSHNAELAV VLQGDTKVPY GSVARVMAAI
ERAGISRVSV VTDSHP