| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2979 |
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| Symbol | |
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| ID | 4006870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 54569 |
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| End bp | 56044 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637949730 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_552366 |
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| Protein GI | 91777158 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG ACTGGGCGGG CCTGCCTGCC ACTTACGGCG ATGTATTGCG CCGGGCGATG
GATTCGCTCT TCCGCACATT CGAAAATTTC AGCGAAGGCA CGTTTATCGT CGACGCCGAT
GCGCGCGTAG TCTGGATCAA CAAGCGCTAT GCGGCGCGCT TCGGCTTTTC GGATCCGGAG
CAGGCCATTG GCCGCGATTG CGAGGCCGTG ATTCCCAACA GCCTGATGCG CGAGGTCGTA
AAGACCGGCA AACCGATTCT GCTCGATATT CTGGAAACGG ACCGTGAACC GCTCGTCGTG
ACGCGTCTGC CGTTGAAGGA CGACTCGGGC ACCACGGTCG GTGCGGTCGG CTTCGCGCTC
TTCGACGAAT TGAAGGCGCT CACGCCGCTC TTTTCCCACT ATTCGCGCGT GCAGGAAGAG
TTGATTGCGA CGCGCCAGTC GCTCGCGCAG GCGCGTCGGG CCAAATATAC GTTCGGCAGT
TTTGTCGGCA CGAGCGCGGC CAGTCTCGAA GTGAAGCGCC AGGCGCGCCG CGCGGCGCAG
CTCGAATCGC CGGTGCTGCT GCTCGGCGAA ACCGGCACCG GCAAGGAACT GCTCGCGCAT
GCCATCCACG GCGGCTCGGC GCGCGCGAAT CAGCCGCTGG TGACGGTCAA CGTCGCGGCG
ATTCCCGATA CCTTGCTCGA AGTCGAGTTC TTCGGCGCCG CGCCCGGCGC GTACACAGGC
GCGGACCGCA AAGGGCGCGT CGGCAAATTC GAACTGGCGA ACGGCGGTAC GCTGTTTCTC
GATGAAATCG GCGACATGCC GCTGCCTTTG CAGGGCAAGC TGCTGCGGGT GCTGCAGGAC
AAGGAGTTCG AACCGCTGGG CTCGAACCGG ATCGTGCGCG CGGACGTCCG GATCATCGCG
GCAACCTCGG CTGATCTGCC CGCACTGGTC GCGGCGGGGC GCTTTCGCGC GGACCTGTTC
TATCGGCTGA ACGTGCTGAC CATCCACGCG CCACCCTTGC GCGAGCGGGC GTCCGATATC
GAAGCGCTTG CCTATGCGAT GCTCGAGGAT CTGTCGACGC AGGCAAGCGG CGCCAGTCAC
TTCGAATTGC AGGACGACGC GCTGCGGCTG CTGTGTTCAT ACGGCTGGCC GGGCAACGTG
CGCGAATTGC GCAACACGCT GGAGCGCGCT GTGATGCTTT CCGACAGCGA GCGGATCGAT
GCGCGGGCGC TGGCGCCGTT TATCGGCTCG GCGCCCGGCG GCGGGCAGCG TCGTCAGGCG
GCAGCCGATG TGCCGTCCCC GGCGCGCGCT CCCGATGCGC CAACCGGCGC GCCCGAACCG
GCCTCGTGGA GCGACGCGAT GGCGGCTTTC GAGAAGCGTT TCCTGACCGA CGCCTTACGC
GCCAACGGCG GTCGCGTGAT CGAGACGGCC AGCCAGATCG GCATGGGCCG CGCGACGCTC
TACAAGAAGA TCGCGGCATA CGGGATCGGC GTTTGA
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| Protein sequence | MMNDWAGLPA TYGDVLRRAM DSLFRTFENF SEGTFIVDAD ARVVWINKRY AARFGFSDPE
QAIGRDCEAV IPNSLMREVV KTGKPILLDI LETDREPLVV TRLPLKDDSG TTVGAVGFAL
FDELKALTPL FSHYSRVQEE LIATRQSLAQ ARRAKYTFGS FVGTSAASLE VKRQARRAAQ
LESPVLLLGE TGTGKELLAH AIHGGSARAN QPLVTVNVAA IPDTLLEVEF FGAAPGAYTG
ADRKGRVGKF ELANGGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPLGSNR IVRADVRIIA
ATSADLPALV AAGRFRADLF YRLNVLTIHA PPLRERASDI EALAYAMLED LSTQASGASH
FELQDDALRL LCSYGWPGNV RELRNTLERA VMLSDSERID ARALAPFIGS APGGGQRRQA
AADVPSPARA PDAPTGAPEP ASWSDAMAAF EKRFLTDALR ANGGRVIETA SQIGMGRATL
YKKIAAYGIG V
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