| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2971 |
|---|
| Symbol | |
|---|
| ID | 4006878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 60728 |
|---|
| End bp | 61471 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637949738 |
|---|
| Product | putative fimbrial chaperone protein |
|---|
| Protein accession | YP_552374 |
|---|
| Protein GI | 91777166 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC TCAAAAAGAT GCCGATAGGA ATCGGTTTTG CCTGTGCACT GCTGGCCGGC
AGTGCACAGG CAAGCGTGAC GATCGGCGGT ACGCGCGTGG TGTATCCGCT CGAGCAGCGT
GAAGTCACGG TCAAGCTGGA TAACGACAGC AAGACACCCT CGCTCGTGCA GGCCTGGATC
GACGATGGCA ATGCGGATGC CAAACCCGGC GAAATCAAAG TGCCGTTCGT GATAACGCCG
CCGATTTTCC GCATGGATGC AAAAAAAGGG CAGACATTGC GCGTGATGTA CACCGGCGAG
CCCTTGCCTC AGGATCGCGA GTCGGTCTAT TGGCTCAACG TTCTGGACAT CCCGCCGAAG
GCAAGCAGTG CGACGGAAGT CAATAGCTTG AGCCTGGCGT ATCGCACCCG CATCAAGGTT
TTCGCGCGGC CGGCCGGGCT GCCCGGCAAA CCGGAAGACG CGGCCGCCCA ACTGAGCTGG
AAGATCGCCG CGTCGGCGGA TGGCAAGAGC CATGCGCTCA GCGTTTCGAA TCCGACGCCT
TACTACGTCT CGTTCAGTGA GATCGACGTG GAGAGCAACG GCCACACGTT CAGAAACGAA
CAGGGTGGCA TGGTTGCTCC ACGCGCATCG GCGGTCCTGC CGATTGCAAA GATGAATGCC
GTTGCCGCGG GCGCGAAGGT GCACTACATC GCCATCAGCG ACTACGGCGG TCCTATCGAC
GGCGATGCGG CTCTCGGCGA GTAA
|
|---|
| Protein sequence | MKLLKKMPIG IGFACALLAG SAQASVTIGG TRVVYPLEQR EVTVKLDNDS KTPSLVQAWI
DDGNADAKPG EIKVPFVITP PIFRMDAKKG QTLRVMYTGE PLPQDRESVY WLNVLDIPPK
ASSATEVNSL SLAYRTRIKV FARPAGLPGK PEDAAAQLSW KIAASADGKS HALSVSNPTP
YYVSFSEIDV ESNGHTFRNE QGGMVAPRAS AVLPIAKMNA VAAGAKVHYI AISDYGGPID
GDAALGE
|
|---|
| |