| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2598 |
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| Symbol | |
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| ID | 4006900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 491547 |
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| End bp | 493955 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637950109 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_552745 |
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| Protein GI | 91777537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000325868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGTGCAC CAAACGTTTC AAACAATAAG CCAATAGGGA TAAGAACGAA AAAATCCAGA
CTCCACGGTG AGACAGCCGG ATTCGCGGGG CGCCTGCTGG CTGCCTTCTC GTTGCTAATA
TTCGCGTTCA GCGCTAACGC AGTCGACTGT TTTTCGCTGT ATGCCCAGTC CGGCGCCACG
CCGGGCTCCA AGACCTGCAA GCTCGACGTT ACGAGCAACA CGCCGGGCGG AATGGGCAAC
TACGCGTGTA TCAATGACCT CGCCCTGATC GATCAGTGGT GCAATTCAAC GGAAACCCCG
CCAGACGATA CCTGCCCCGT GGCAGACCCG GTGTTTCCCG CGAATGGGAT TGTGACTTTC
TCTGAAACTG ACTTTGCAAG CGGTGACGCG TCGCCGCTTG TGTTTAGTCG TACCTACCTT
TCGAAGCCGT TCGACAAAGC GCAGGTAGCG ATGGGCGGGT ACTGGGCAAG TAACTGGCAG
CGACGGCTTG ATCTGACCTC GGTCAATGCA AGCACGCCGA AAATCACCGC GTATCGGAGT
AACGGCCAGC CTCTGATCTT CAAGTGGGTT AACGGCGGGT GGGCGGTGCC GGGTACGTCG
GGTCTTTCTC TCTTGAAAGC TGGCGACGGA TACTTCTACC TGAAGGACGA ACGGCTTGGC
ACGACCGAAA CATACTCCGT CAGCACAGGT CTGTTTCACT CCGAGACAAC ACGCACGGGT
ATGTATCGTG AAGTTGAATA CGTTGGACAA CAGATAGATT CGATCGCGCA GTGGCCCGTT
GATCGGACCG GGCAGGCGGC ATCGCGGCTG ACACTTAGTC TGACATATGA CAGTAATGGT
CGCATTCTGA GTGTAGTGCC GCCTTCGGGC AACGCGACAC ATTATGCGTA CGATGCGAAA
GGCAATCTTG TTTCAGTAAC CGCGCCGATT GGATACGTTC GTCAGTACCT TTATGAGGAT
GCCCGCTTCC CCAATGCGAT GACCGGGATA AAGGACGAAT CCGGTTCACG GATTGCAACA
TGGACCTACG ATTCCAGCGG ACGCGCAATC TCAGTCACCC ATCCGGACAC GACGCGTAAC
GTTTCTTTCA GTTATGGCGC GAACACGACC ACTGTTAGCA ATATGTCCGG CAACAGCACG
TATTCTTTTA ATGTTGGAGA CACGTCGCGT CCTGGCTCAA TTGTTACGCC TGGCGGCGCG
GTCTCACGTA CATGGGATAC ATCAGGGAAC CTGAATCAGA CAATTACACC GGATGGGAAT
ACACAGTACA CGTGGGACGG CGCCAACCGG CCGACGAAAG CAGTTGCGAC AGTCTCTGGC
AACAGGACGG TAACGACGAT CGAGTATAGC GACAGTACCT CGTTGCGTCC GCATCTGGTC
GCCACGCCGG GTAAAATCCG CGCGTTTGTC TATGACCAGG CCGGCAACGT TACTGGCTAC
GCCGAGACGG AGACAAGCGA TCTGACGGGC GACCAGGGGA TGCAAGCCGT TGGGACCGGT
AACCAGTGGA CAGTCGGTGC ACGCTACGAT TCGGCGAGTC GCCTTCTGTC GGCTGCGATT
ACCCGTAATG GCTCGAAGCG TGAAGACTGG ACCTACACAT ACGATGTACG GGGCAATGTC
GAGTCAGTGC AGGATGCCGT ATCTGGCTGG TCGATGCGAA CGCTCTCGCG CAATGCTGAG
AATCGTGCAA CGCAGATAGC TGGAAACAGC GGTCAGGCGA GCATCGGGTA CGATGAGCGC
GGTCGCGTAA AGTCCTTTCA GTATAGCGAA CCGGCAAGTT CGTTAAATGG TGGACTTGCC
CGTGTACTGG CAGTCGATTA CCGGTACGGT CCAGATGGTT CGGTGTCCTC GCGCACGGCT
CAGGTTTCAA CGAATGGAGC CTGGTGGAAG CCGATTAGTG ATGCTGAACT GGGTGTCTGG
CTGACGAACT GGGAACTCGG GAACGACCCG GTTGCGCCAC CCGCGAACCT GACAGGACTC
CAGTCGGATG CTCCAGCATT CGTTCCTGAT ATGTGCGTCG AATGCTACAT GGCCTGGAAG
GCGTTGCCGA CAGGTAAGCT ATTTGGGCAT GAACTGGGTG AAACGCTACC GGCTTGGCGC
GAGGCAACCG AGTTGATGGT CAGCGATCAG GCGCAGGTTC CTTATCCGGT GCTTGTGCCG
GATCTGACGA GTTCTGCGAA ACGGTCAACG CTTTACAGTA CGCTTTTTGG TGGCGGGAGC
GGGGATGGGG GAATGGTAAA GTGCGGTGGC AGCGGGAACA ATGAGTGGCG CGAGGCGGAT
TGTCATGCGA AGTATATGTA CGATATGCAA ATTTGCAATT CGCTTGGCAC CATAATGGGC
AAGAGCCGAG GGCGTGCGCT TTGCAAACAG CAAGCGTTCG AGGATTATCA AGAGTGTAGA
GGTCATTGA
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| Protein sequence | MCAPNVSNNK PIGIRTKKSR LHGETAGFAG RLLAAFSLLI FAFSANAVDC FSLYAQSGAT
PGSKTCKLDV TSNTPGGMGN YACINDLALI DQWCNSTETP PDDTCPVADP VFPANGIVTF
SETDFASGDA SPLVFSRTYL SKPFDKAQVA MGGYWASNWQ RRLDLTSVNA STPKITAYRS
NGQPLIFKWV NGGWAVPGTS GLSLLKAGDG YFYLKDERLG TTETYSVSTG LFHSETTRTG
MYREVEYVGQ QIDSIAQWPV DRTGQAASRL TLSLTYDSNG RILSVVPPSG NATHYAYDAK
GNLVSVTAPI GYVRQYLYED ARFPNAMTGI KDESGSRIAT WTYDSSGRAI SVTHPDTTRN
VSFSYGANTT TVSNMSGNST YSFNVGDTSR PGSIVTPGGA VSRTWDTSGN LNQTITPDGN
TQYTWDGANR PTKAVATVSG NRTVTTIEYS DSTSLRPHLV ATPGKIRAFV YDQAGNVTGY
AETETSDLTG DQGMQAVGTG NQWTVGARYD SASRLLSAAI TRNGSKREDW TYTYDVRGNV
ESVQDAVSGW SMRTLSRNAE NRATQIAGNS GQASIGYDER GRVKSFQYSE PASSLNGGLA
RVLAVDYRYG PDGSVSSRTA QVSTNGAWWK PISDAELGVW LTNWELGNDP VAPPANLTGL
QSDAPAFVPD MCVECYMAWK ALPTGKLFGH ELGETLPAWR EATELMVSDQ AQVPYPVLVP
DLTSSAKRST LYSTLFGGGS GDGGMVKCGG SGNNEWREAD CHAKYMYDMQ ICNSLGTIMG
KSRGRALCKQ QAFEDYQECR GH
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