| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2544 |
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| Symbol | |
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| ID | 4006960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 574127 |
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| End bp | 575239 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637950168 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_552798 |
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| Protein GI | 91777590 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.66454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.363997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC CTCTGTCCCA CCGCTGCAAC AAGGCAGTCA ACGACGCCGA TGCCGATGCC
GCCACGCAAG CCGATTCTTC GTCGCGTTCG CGGCGCGCCT TTCTGCAGCG AGCCGGAGCG
CTCGCCGGCG CGGCGATCCT CGGCGCGCCC GCCATCGTGC GCGCTCAATC TAAAAGCATC
AGCGTAACCT GTTGGGGCGG TGCGTATGAG GCAGCGGTGC GTGCCGCCTT CGCCGAGCCG
TTCACGAAAG AGACCGGCAT CGCGGTGAAT CTCGTCAACA GCGCCGACCT CGCGCGGATG
AAGGTGCAGG TCGAATCGAA GAACGTCTCG TGGGACGTGT TCGACAGCAT TGGGCCGCAG
ATCGTCGCGG GCTCCCGTGG CGGGATGTGG GAAAAGCTCG ATCCGGCCAT CGTCAGGACC
GACGGACTCA TCACCAGGAC GGGCGCGGAC TTTGTCGGCA CCTATTCGTA CGCGGGCGGT
ATCGGCTTCG ACCCGAAGCG CGCCGGCAAG CATCCGCTCA CCTATGCCGA GTTCTGGGAC
GTGACGGCGT TTCCGGGACG CCGCGGCCTG CGCCCGCGGG TGAGCGAGAA CCTCGAGATG
GCGTTGCTCG CCGACGGCGT CGCGCCCGAC AAGCTCTATC CGCTCGACAT CGAGCGAGCC
TTCAAGGCAA TGGACCGTAT CAAGCCGGCG GTGCGCAAGT GGATCGAGAC GACGCCCGAG
ACGGTGTCGC TCATCGCGAG CAACGAACTC GATTTCACTT ACACCTACCT GAGCCGCGTG
CTGCCGGCGC AGCGCGCGGG GACGTCGATC GCGATGTCGA TGAAGCAGAC GCTCAACAGC
CTCGAATATC TCGCGGTGCC GAAGTACGGC AAGAACACGC AGGCGGCGAT GAAATACGTG
GCGTTCTGCC TGCGCCCGGA CCGTCAGGCG GCGTTCTGCG AAAAGGTGGA GTTCGCACCG
AACGTGGCTC AGGCGTTGCC GCTCGTCTCC GCTACCGCGA AGGCGCGCAT GCCGGACATG
CACGACCCTA ACAGCGTGAT CATCAACGAC ACGTGGTGGG GCGATCATTA CGACGCGCTG
CAGAACCGTT TTACGACGTG GATGCTGACG TAA
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| Protein sequence | MKAPLSHRCN KAVNDADADA ATQADSSSRS RRAFLQRAGA LAGAAILGAP AIVRAQSKSI
SVTCWGGAYE AAVRAAFAEP FTKETGIAVN LVNSADLARM KVQVESKNVS WDVFDSIGPQ
IVAGSRGGMW EKLDPAIVRT DGLITRTGAD FVGTYSYAGG IGFDPKRAGK HPLTYAEFWD
VTAFPGRRGL RPRVSENLEM ALLADGVAPD KLYPLDIERA FKAMDRIKPA VRKWIETTPE
TVSLIASNEL DFTYTYLSRV LPAQRAGTSI AMSMKQTLNS LEYLAVPKYG KNTQAAMKYV
AFCLRPDRQA AFCEKVEFAP NVAQALPLVS ATAKARMPDM HDPNSVIIND TWWGDHYDAL
QNRFTTWMLT
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