| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2288 |
|---|
| Symbol | |
|---|
| ID | 4007216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 843954 |
|---|
| End bp | 845243 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637950418 |
|---|
| Product | major facilitator superfamily metabolite/H(+) symporter |
|---|
| Protein accession | YP_553048 |
|---|
| Protein GI | 91777840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0638565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACTG TTGCCGGCAA AGCGGGTCCA CTATCGCGTG CCGAACTCGG GCGTATCGTC
GCCGCCATCG TGATCGGCAA TGGTTTTGTC GCCTACGACT TCACCGTCTA TAGTTTTGCG
GCCGTTGCGA TCGGCAATCT GTTCTTTCCG TCGCATGACC CCGCATCGTC GCTGCTGCTT
TCTCTCGCCA CCTTTGGCGC GGGCTTCGTG ATGCGCCCGC TCGGCGCGAT CATGATCGGC
CATCTTGCCG ACAGCCGTGG CCGTAAAGCC GGCCTCACCG CATCGCTCAC GTTGATGACG
CTCGGCACAT GGCTGATCGC ATGCCTGCCG GGCTACGCGT CGATCGGTCC GGCCGCGACC
GTGCTGATGG TGCTCGCGCG CCTGATGCAG GGGCTCGCGG CGGGCGGCGA AATCGGCCCG
GCGTCGGCGT CGCTGATGGA GTCGGCCGGC TACCGGCATC GCTGTTTCAT GGTGAGCTGG
CGCGGCGCCA GCCAGGGCGC GGCCGCTTTC GCCGCCGCGC TGGTCGGCGC GAGCACCACT
GCGCTGCTGT CGCCCGCCGC CATGCATGCA TGGGGCTGGC GCATTCCGTT CGTGCTGGGC
GGGCTGATCG GCCCGGTCGG CTGGTATCTG CGGCGCCGGA TGCCGGCAGC GGCGCCGCGG
CAGCGTACGC GGCTCAACCC GCGGCGCCTG TTCGCGGAGC ACACGCGCCC GCTCGTCTGC
GGACTTCTGA TGATGGCGGC GCCTTCGGTG AGCATCTACG TCACCGTGTT CTACATGCCG
GCCTACCTGG TCCGTACACT GCACCGGCCG CCGACCATCA GCCTCCTGAC GGCCTGTCTG
TCCGGCTTCG TGATTCTCGT GGTGACGCCG CTGATCGGGC TCGCGGCCGA CCGGCTCGCG
AGCCGCAAGA CGCTGCAATA CGTATCGCTC GTGGCTTCGC TGGCGGCGGC CTGGCCCGCT
TTCTGGGCGC TGACGCATGG CGCGGGCAAT CTCGTGTCGC TCGTGATCAT CACGGCTTAC
GTGGCGCTCG CGGTGAACAA CGCCGGCGCC GGCTCGGTGC TGATGATGGA GGCGTTCCCC
GCTCACCGGC GCGCGGCCGG ATTGTCGGTG ATCTACAGCT TCGGCGTGGT CCTGTTCGGT
GGATTTTCGC CGTTTCTGGT GACGTGGCTC ATCAACCGGA CCGGTGATCC GATGGTGCCG
GCGTGGTATC TGATGGGCGC GACCGCGCTC ACGCTCGCGG CGCTGAAGGC GTTTCCGGAA
CGGACAGAGG CCGACGCCCG CGTCGCCTGA
|
|---|
| Protein sequence | MHTVAGKAGP LSRAELGRIV AAIVIGNGFV AYDFTVYSFA AVAIGNLFFP SHDPASSLLL
SLATFGAGFV MRPLGAIMIG HLADSRGRKA GLTASLTLMT LGTWLIACLP GYASIGPAAT
VLMVLARLMQ GLAAGGEIGP ASASLMESAG YRHRCFMVSW RGASQGAAAF AAALVGASTT
ALLSPAAMHA WGWRIPFVLG GLIGPVGWYL RRRMPAAAPR QRTRLNPRRL FAEHTRPLVC
GLLMMAAPSV SIYVTVFYMP AYLVRTLHRP PTISLLTACL SGFVILVVTP LIGLAADRLA
SRKTLQYVSL VASLAAAWPA FWALTHGAGN LVSLVIITAY VALAVNNAGA GSVLMMEAFP
AHRRAAGLSV IYSFGVVLFG GFSPFLVTWL INRTGDPMVP AWYLMGATAL TLAALKAFPE
RTEADARVA
|
|---|
| |