| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2234 |
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| Symbol | |
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| ID | 4007270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 908476 |
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| End bp | 909639 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637950472 |
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| Product | putative thiamine pyrophosphate enzyme |
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| Protein accession | YP_553102 |
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| Protein GI | 91777894 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG CTGCACAGTT TGTCGAGGCG GCGCGCGAGC GCGGCTTCGA CTGGTATGCG
GGCGTGCCGT GTTCGTATCT CACGCCGTTC ATCAACTACG TGTTGCAGGA CGAGTCGCTG
CATTACGTGT CGGCGGCCAA TGAAGGCGAC GCCGTCGCGT TGATCGCGGG CGTCACGCTC
GGCGCGCGCA ACGGCCGGCG CGGCATCACC ATGATGCAGA ACTCCGGGCT CGGCAACGCC
GTGAGCCCGT TGACCTCGCT CACATGGACC TTCCGTCTGC CGCAATTGCT GATCGTCACG
TGGCGCGGCC AGCCCGGTGT CGCCGACGAA CCGCAGCACG CGCTGATGGG CCCCATCACG
CCCGCGATGC TCGAGACGAT GGAGATTCCG TGGGAAACCT TCCCGACCGA AGCCGACGCG
ATCGGCCCGG CTCTCGATCG CGCCATCGCG CATATGGATG AGACCGGCCG CCCTTATGCG
CTGGTGATGC AGAAGGGCAG CGTGGCGCCG TACGAGTTGA AGGACAGCGG CGCGAGCGCG
CGCCGCGTAC CCGTTGCGCC GCAATCGCAG TTCACGAATG TGCCGGCGAG CGAGCTGGCG
TCGCGTCACG ACGCGCTGAA CAAGGTGATC GCGCACACGC CGCTCGAATC GACCGTCGTG
CTCGCGTCGA CCGGATTTTG CGGACGCGAA CTCTACGCGA TCGACGACCG TCCGAACCAG
TTGTACATGG TCGGCTCGAT GGGTTGCGTG ACGCCGTTCG CGCTGGGTCT TGCGCTCGCG
CGTCCCGATC TGCACGTGGT CGCGCTCGAC GGCGACGGCG CCGCGCTGAT GCGCATGGGT
GCGTTCGCGA CCATCGGCGC CTACGGTCCG TCGAATCTCA CGCATTTGCT GCTCGATAAC
GGCGCGCATG ACTCCACCGG CGGCCAGGCG ACGGTGTCGT CGCAGGTTTC ATTTGCGGGC
GTCGCCGCGG CGTGCGGTTA TGCGTCGGCG GTCGAAAGCG ACGACGCGGC CGTGATCGAC
GCGCTGTTCG AAGCGGCGCC GCCCGACGGC CCGCGCTTCG CGCGTCTGGC GATTCGCCGC
GGCACGCCCG ACGGGCTGCC GCGTCCCACC ATCACGCCGC CCGATGTGAA GACGCGTCTC
ATGCGCCACA TCGGCGCGGC CTGA
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| Protein sequence | MIEAAQFVEA ARERGFDWYA GVPCSYLTPF INYVLQDESL HYVSAANEGD AVALIAGVTL
GARNGRRGIT MMQNSGLGNA VSPLTSLTWT FRLPQLLIVT WRGQPGVADE PQHALMGPIT
PAMLETMEIP WETFPTEADA IGPALDRAIA HMDETGRPYA LVMQKGSVAP YELKDSGASA
RRVPVAPQSQ FTNVPASELA SRHDALNKVI AHTPLESTVV LASTGFCGRE LYAIDDRPNQ
LYMVGSMGCV TPFALGLALA RPDLHVVALD GDGAALMRMG AFATIGAYGP SNLTHLLLDN
GAHDSTGGQA TVSSQVSFAG VAAACGYASA VESDDAAVID ALFEAAPPDG PRFARLAIRR
GTPDGLPRPT ITPPDVKTRL MRHIGAA
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