Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2131 |
Symbol | |
ID | 4007373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1017291 |
End bp | 1018451 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637950575 |
Product | OmpC family outer membrane porin |
Protein accession | YP_553205 |
Protein GI | 91777997 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.283812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGA AATGCGCGAC ATCATTCGTT CTGGTTGTAT GTGCCGGCGC GGCCCACGCG CAAAACAGTC TGACGCTATA CGGCATTGCC GAAACCGGTA TCAACTACGT CAGCAATGCC AACGGCGGGC GCCAGTTCAA CATGGTCAGC GGCGAATGGT ACGGCAGCCG CTGGGGCCTG AAAGGCACCG AAGACCTCGG CGCCGGTCAG TCGGTGATCT TCCGGCTGGA GAACGGTTTC GACATCGACA CGGGCAAGCT CGGACAGAAC GGCCTGCTGT TCGGCCGCGC GGCGTATGTC GGCATCGACT CGAAGCAGTT CGGCACGTTG ACCGTGGGAC GCCAGTACTC CACCGTCTAT GAGTTCGTCG GCGCGAATCT CGTGGCATCG AGTCGCTGGG GCGGCGGCTT CATTGCTCAT GCCGGCGACG TCGACAATCT GAACAATACC TTCCGCGTGA ACAACTCGAT CCGCTACAAC AGCATCAGCT ATCACGGCTT CACGGTTGGC GGTTTGTACA GCCTCGGCGG CACGGGCGGC AATTTCAACA AGAATTCGGG CTGGGGTGCG GGCATCGGCT ATACGGGCGG TGGCCTGCAG GCCGCAGTCG CGTACACCGA TATGCAGGAT CCGTTCGTGT CCGCCTACAA CAACGGCGCC AATGCACCCG CTGCGGTTAC ATCGCCGATT TATAACGCTT ATGCTTCGGC CCGCAGCCTC AACATACTCG CAGCGGGCGC CATTTATACG ATCGGCAAGC TGTATTTCGG CGGCACCTAT TCAAACAGCC GTTTTCTGCA ACTGGGTGCC GATCCGGGCA ACGCGGGCGC AGGGGCCCGT CTGCGAGGCA CCGCGGCACT CAATGATTAC GAAGCGGAAA TAGGCTATCA GTTCACCCCG GCATTTTCGA CGACTGCCGC CTATAACTAC ACCCGGCGTG CCTCGGTGAA CGGCGATGTC GGCGCGAAAT ACAACCAGGT GTCGATCGGG GCCGACTACA TCGTCTCCAA ACGCACCGAC TTCTACCTGG TCGCTTCGTA TCAGAAGGCC TCGGGTGTCA ATTCAAACGG CACGCCAGCG GTGGCCGCGC TCAACTTCCT GTCGCCGTCC TCGGTCAATC ACCAGGGCGT CGTCCGGCTT GCCATCCGGC ATCTTTTCTG A
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Protein sequence | MNMKCATSFV LVVCAGAAHA QNSLTLYGIA ETGINYVSNA NGGRQFNMVS GEWYGSRWGL KGTEDLGAGQ SVIFRLENGF DIDTGKLGQN GLLFGRAAYV GIDSKQFGTL TVGRQYSTVY EFVGANLVAS SRWGGGFIAH AGDVDNLNNT FRVNNSIRYN SISYHGFTVG GLYSLGGTGG NFNKNSGWGA GIGYTGGGLQ AAVAYTDMQD PFVSAYNNGA NAPAAVTSPI YNAYASARSL NILAAGAIYT IGKLYFGGTY SNSRFLQLGA DPGNAGAGAR LRGTAALNDY EAEIGYQFTP AFSTTAAYNY TRRASVNGDV GAKYNQVSIG ADYIVSKRTD FYLVASYQKA SGVNSNGTPA VAALNFLSPS SVNHQGVVRL AIRHLF
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