| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2010 |
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| Symbol | |
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| ID | 4007494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1155149 |
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| End bp | 1158469 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637950695 |
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| Product | AcrB/AcrD/AcrF family cation efflux protein |
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| Protein accession | YP_553325 |
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| Protein GI | 91778117 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0120715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATCT CGGCGCTGTT CATCCGACGC CCGGTGGCGA CCGCGCTGCT GGCGATCGCG
ATCCTGATTT CGGGCGCGCT CGCGTATTTC CGGCTGCCGG TTGCGCCGCT GCCGAACATC
GCGTTTCCGG TGATCGCGCT GCAGGCGAAC ATGGCGGGCG CGAGCCCGGA AACGATGGCC
GCGACCGTCG CCGAGCCGCT GGAACGGCGG CTCGCCACCA TCGCCGACGT GAACCAGCTC
ACCTCGATCA GCTACGTGGG CTCCTCGATG ATCATCGTCG TGTTCGGCCT GAACCGCGAC
ATCAACGGCG CGGCGCGCGA CGTGCAGGCC GCCATCCAGG CCGCGCGCGC CGATCTGCCG
ACCACGCTGC GCAGCAACCC GACGTATCGC CAGTACAACC CGGCCGGCGC GCCGATCATG
GTGCTCGCGC TGACCTCCGA CACGCTGACC AAAGCCCAGC TCTACGACTC GGCCGATTCG
GTGATCCAGC AGCAGTTGTC GCAGGTCGAC GGCGTCGGGC AGATCACGCT GGGCGGCGGC
GCGTTGCCCT CGGTGCGCGT CGAGCTGGAA CCGGGCAAGC TGAACAGCTA CGGCATCGGC
CTGGAAGACG TGCGCGCCGC GATCGGCGCG GCGAACGCGA ATAGCGCGAA AGGCCACATC
GACCAGGGCG AGCAGCGCTA TGTGGTCACG TCGAACGATC AGATCAGCAA GGCCGCGCCG
TATCGCGACG TGGTGATCGC CTATCGCGAC GGCGCACCGG TCCTGCTGCG CGATGTCGCC
CAGGTGCGCG ATTCGAACGA GAACATCCGC AACGCCGGAC TCTACAACGG CAAGTCGGCG
GTGCTCGTGA TCGTCTATCC GACGCCTGGC AGCAACGTGG TGCAGACGGT CGAGCAGATC
CGCTCGCGCC TGCCGATCAT CGAAGCCGCA TTGCCGAGCG CGATCCACGT GAATGTCGCG
ATCGACCGCT CGGAGTCGGT GCGCGCTTCG GTGGCCGACA CCGAGCGCAC GCTGTTCATC
GCGGTGCTGC TGGTGGTGGG CGTGGTGTTC GTGTTCCTGC TGTCGCCGCG CGCCACGCTG
ATTCCGGCGG TCGCGCTGCC GCTCTCGATC GTCGGCTCGT TCGGACCGAT GTATCTGCTC
GGCTATAGCA TCGACAACCT CTCGCTGATG GCGCTGACGA TCGGCACCGG CTTCGTGGTC
GACGACGCCG TGGTGGTGCT GGAGAACATC GTGCGGCATC TCGAAGCCGG TCTCGATCCG
AAGGAAGCCG CGCTGCGCGG CAGCGCCGAG GTCGGCTTCA CGGTGATCTC GATGAGTCTC
TCGCTGATCG CCGTGTTCCT GCCGATCCTG CTGATGCCGG GTATTGTCGG GCTGCTGTTC
CATGAGTTCG CCGTCACGCT CTCGATTGCG ATCCTGCTGT CGCTGCTCAT TTCGCTGACC
ATCACGCCGG TCATGTGCGC CTATCTGCTC AGCCGCGAGC GCACGATGCA TCTGCAGTCG
CGCTGGGCGC ACTGGGTCGA GGCCCAGTTC GAGCGCTTCA AGCAGGCTTA TGCGCGCTCG
CTCGCGGCGG CGCTCGATCA CGCGCTCGCG GTCGTCCTGC TGCTGATCGG CCTGCTCGTG
CTCAACGTGT TCCTGGTGCC GCTGCTGTCC GGCACGTTCT TTCCGGAGCA GGACACCGGC
ATCCTGATCG GCCAGATCAT CGCCGACCAG AGCGTCTCGT TCAACGCAAT GGAAAAGAAG
CTCGCGCAAT TGCAGGCGAT CGTGAAGCAG GACCCGGCGG TGGCATCGGT GGCGGGCTTC
ACCGGCGGGC GCGCACTGAA CACGGCCAAT GTGTTCATCG AACTGAAACC GCTCGCGCAA
CGCCATCTGT CGGCGACCGA GGTGGTCAAC CGGCTGCGTC CCAAACTCAA TGCCGTATCG
GGCGCCCGGC TGTTCCTGCA GGCGCAGCAG GATCTGCAGA TCGGCGGGCG CCAGGCCGCG
GCCGAATACC AGTACACCCT CTCCAGCGAC GATGCGAACG CGCTCTTCAC CTGGGTGCCG
AAACTCGTCA CCGAACTCGG CAAATACCGT GGAAAACTGG AAGACGTGAA TTCGGATCTG
CAGCAGAACG GCTTGCAGAC CTACGTGAAC TTCAACCGCG CGACCGCCAC GCGCTACGGT
TTCCAGCCGA ACCAGATCGA CAACGTGCTG TACGACGCGT TCGGGCAGCG CACCGTGTCG
ACCATCTACA ACCCGCTCAA TCAGTACTTT GTCGTGATGG AAGTCGCGCC CGCCTACTGG
CAATATCCGC AAGCGCTCAA CCAGATTTTC CTGAGCACCT CTGCCGGCAA CCCGAGCGGC
ACGCAGCAGA CGCAGATGTC GCGCGCCACC GTCAAAGCCG TGCAGCAGGC AATGGCTGTC
GGCAGCGCGT CGAGCAGCAG CGCGAATACG AACACCCTGA ACGCCGACGC CGAAGCGAAC
CAGCAGACCA ACAGCATCTC GAACAGCAAG GGCGGCAATT CCAGCGGCAG CGCGGACAGC
ACGGCGGCGG AAACGATGGT CCCGCTTTCG GCGATGATGA CCTTCTCGAA CAGCCACACC
GCGACCCAGG TGAACCATCA GAGCGGGCTC GTGGCTGGCA CCATCTCGTT CAATCTGCCG
GCCGGCGGAT CGCTGAGCGA GGCCGGCCAG CTCATTGCGC AGGCCGAGCG CGACATCGGC
ATGCCCGCGT CGGTGCACGG CGCGTTCGCG GGCGCCGCGC AAGCCTATGC GCAGTCGATG
GGCGCCGTGC CGCTGCTGAT TCTCGCCGCG CTGGTGGTGG TCTATATCGT GCTCGGCATA
CTGTACGAGA ATACGGTGCA CCCGCTCACG ATCCTGTCCA CGCTGCCGTC GGCGGGCATC
GGCGCGACAC TCGCCTTGCT GATCTTCGGC ACGCCCTTTT CGGTGATCGC GATGATCGGC
ATCATTCTGC TGATCGGTAT CGTCAAGAAA AACGGCATCA TGATGGTCGA CGTCGCGATC
CAGTTGCAAC GCGAGGAAGG CATGAATGCG CGCGATGCGA TTCACCAGGC CGCGGTGGTG
CGGCTGCGCC CGATCATGAT GACGACCGCG GCCGCCGTGC TGGGCGCGGT GCCGCTTGCG
ATCGGCATCG GCCAGGGTGC GTCGCTGCGC CAGCCGCTCG GCGTGACGGT CATGGGCGGC
CTGCTCGTGA GTCAGGTTTT CACGTTATAC ACGACGCCGG TGATCTACCT GTACCTCGAC
CGGCTGCGCG CGCGGCTGGC GAGATGGTCA GCGCGCCTGC CGTGGAATCG CCGCGACGAC
GCACCGGACA CGAGCGCATG A
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| Protein sequence | MNISALFIRR PVATALLAIA ILISGALAYF RLPVAPLPNI AFPVIALQAN MAGASPETMA
ATVAEPLERR LATIADVNQL TSISYVGSSM IIVVFGLNRD INGAARDVQA AIQAARADLP
TTLRSNPTYR QYNPAGAPIM VLALTSDTLT KAQLYDSADS VIQQQLSQVD GVGQITLGGG
ALPSVRVELE PGKLNSYGIG LEDVRAAIGA ANANSAKGHI DQGEQRYVVT SNDQISKAAP
YRDVVIAYRD GAPVLLRDVA QVRDSNENIR NAGLYNGKSA VLVIVYPTPG SNVVQTVEQI
RSRLPIIEAA LPSAIHVNVA IDRSESVRAS VADTERTLFI AVLLVVGVVF VFLLSPRATL
IPAVALPLSI VGSFGPMYLL GYSIDNLSLM ALTIGTGFVV DDAVVVLENI VRHLEAGLDP
KEAALRGSAE VGFTVISMSL SLIAVFLPIL LMPGIVGLLF HEFAVTLSIA ILLSLLISLT
ITPVMCAYLL SRERTMHLQS RWAHWVEAQF ERFKQAYARS LAAALDHALA VVLLLIGLLV
LNVFLVPLLS GTFFPEQDTG ILIGQIIADQ SVSFNAMEKK LAQLQAIVKQ DPAVASVAGF
TGGRALNTAN VFIELKPLAQ RHLSATEVVN RLRPKLNAVS GARLFLQAQQ DLQIGGRQAA
AEYQYTLSSD DANALFTWVP KLVTELGKYR GKLEDVNSDL QQNGLQTYVN FNRATATRYG
FQPNQIDNVL YDAFGQRTVS TIYNPLNQYF VVMEVAPAYW QYPQALNQIF LSTSAGNPSG
TQQTQMSRAT VKAVQQAMAV GSASSSSANT NTLNADAEAN QQTNSISNSK GGNSSGSADS
TAAETMVPLS AMMTFSNSHT ATQVNHQSGL VAGTISFNLP AGGSLSEAGQ LIAQAERDIG
MPASVHGAFA GAAQAYAQSM GAVPLLILAA LVVVYIVLGI LYENTVHPLT ILSTLPSAGI
GATLALLIFG TPFSVIAMIG IILLIGIVKK NGIMMVDVAI QLQREEGMNA RDAIHQAAVV
RLRPIMMTTA AAVLGAVPLA IGIGQGASLR QPLGVTVMGG LLVSQVFTLY TTPVIYLYLD
RLRARLARWS ARLPWNRRDD APDTSA
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