| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1888 |
|---|
| Symbol | |
|---|
| ID | 4007614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1277779 |
|---|
| End bp | 1278609 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637950801 |
|---|
| Product | putative coenzyme A transferase |
|---|
| Protein accession | YP_553431 |
|---|
| Protein GI | 91778223 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.817278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.651618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCCG GATTTCCCGA CAAACACAAA CAGGTGTCAC TGGCCGAGAT GGTGGCACGC
ATACCCGACG GCGCGTCGAT CGGGCTTGGC GGTAGTTTCC TGCATCGTGG ACCGTTCGCA
TTCGTGCGCG AACTGATTCG CCAGAAAAAG CGCGACCTCG AAATCATCAA GCAGTCGCCC
GGTTACGACA TCGACATTCT GAGCCGCGCC GGCGTGGCCA CTCGCACGCG TTGCGGGATC
GTCGCCATGG AAGGCAATTT CGGCCTCGCG CCCTACTACC GGCGCGCTGT GGAACGCGGC
GAGCTCAAGC TGGAAGAGCA TGCGTGCGCG AGCCTGACCG CCGGTTTGCG CGCCGCGGCG
TTCGGCGTGC CCTTCATGCC GTGCGGCGGT CTGCACGGCA GCGAACTCAC CCGCATCAAC
CACTGGCAAT GTCTGGACGA CCCGTACGGC AGCGGCCAGC AGACCTGGGT CATCCCCGCC
ATTTCGCCGG ACTACGCGGT GATTCACGCG TCGAGCGTCG ACCGGTCGGG AAATGTGAGA
ATCGCCGGCA CCTATCACTG GGACCGCATC ATGAGCCGCG CGGCGAAAAG CGTCCTGGTG
GTCGCCGAGA CGATCTCCGA CGAAGATTTC TCCGCGCAAC CCGAACTGAC CGTGGTGCCC
TACTTCATGG TCGAGCGGTT CGCTATCGTG CCGAACGGCG CGTGGCCGGG CTCCTGCTGG
CCGCTGTATG AAATCGACTA TCCGGCCGTT CAGGCGTATC TGCCCGACGG CGACGAGGCA
CTTGCCGCGC ATCTGGCCGC CGCACCCGAA ACGGAGCTTG CTCATGGCTG A
|
|---|
| Protein sequence | MGSGFPDKHK QVSLAEMVAR IPDGASIGLG GSFLHRGPFA FVRELIRQKK RDLEIIKQSP
GYDIDILSRA GVATRTRCGI VAMEGNFGLA PYYRRAVERG ELKLEEHACA SLTAGLRAAA
FGVPFMPCGG LHGSELTRIN HWQCLDDPYG SGQQTWVIPA ISPDYAVIHA SSVDRSGNVR
IAGTYHWDRI MSRAAKSVLV VAETISDEDF SAQPELTVVP YFMVERFAIV PNGAWPGSCW
PLYEIDYPAV QAYLPDGDEA LAAHLAAAPE TELAHG
|
|---|
| |