| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1506 |
|---|
| Symbol | |
|---|
| ID | 4008005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1721712 |
|---|
| End bp | 1723061 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637951188 |
|---|
| Product | putative HipA-like protein |
|---|
| Protein accession | YP_553808 |
|---|
| Protein GI | 91778600 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.265752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0493341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCC GCTCGCACAG CCAAACCCTT TCCCTTTGGG CCAACGGCGA CTTCGTCGGG
CGTTGGACCA TCAATGCCAA TGGGGAATCC GAGCTGCAGT ACGACAGGGC CTGGCGCGAA
TCGGCGCGTG GCCGCCCGAT ATCCCTGTCG CTGCCATTCA ATCTCCACAA CGAACCGCTG
AAGGGAGACA GTGTCGCCCA CTACTTCGAA GGCCTGCTGC CGGATAGCGA GACGATTCGA
AAGCGGGTGG CGGCGCGCTT CAGGACGGGC TCCATCGGCG CATTCGACCT GCTGGCCGCG
ATTGGCCGCG ACTGCGTGGG AGCCTTGCAG CTCCTGCCGG ACGAGGCTGT GCCGGAGGGG
CTGGACAAGG TCGAGGGTAT CGTCGTCGAC GAAGAGGCCA TCGAGCGACA TCTGCTGGAA
GTCGTCAGTC CGGACCGTTT CGCCGCGGCG AGGGACCCCG ACGACGACTT CCGCATCTCG
CTGGCCGGCG CGCAGGAGAA AGACGCCTTT CTGAGGTGGA ACGGGCAATG GATGAAGCCG
CGCGGCACCA CGCCGACAAC GCACATATTC AAGCTGCCTA TCGGCATGGT GGGCGGGCGC
AAGGCCGACT TCACCACCTC GGTGGACAAC GAGTGGCTGT GCCTGCGGCT GTGCAAGGAA
TACGGGCTGC CCACGGCAGA GGCGCGCATC GAGACGTTTG GCTCGCAACG GGTGCTCGTC
GTCGAGCGTT TCGACCGGGT GCTCTCGCGC AGTGGAAAGC AGCTGTTCCG GCTTATCCAG
GAGGATTTCT GCCAGGCAAC CGGCACATCG CCGCTAGTCA AATACGAGAA CGAGGGGGGG
CCGGGCCTTC AGCAGATGTT CACGCTTTTG CAGCAGTCGC AGCAGGCGGT AGAAGACATG
CACACGCTCA TGGCCTCGCA AATCATTTTC TGGATGATGC GCGCGCCGGA CGGTCATGCG
AAGAACTTCA GCATCCAGCT GCTTGCAGGC GGCGCGGGAC GCTTCAGGCT GAGTCCAATC
TACGATGTGA TGTCCGCCTA TCCGGTCATC GGCGACGGGC CGAGTCAGTG GGCGGACCAG
GAAATCAAAC TGGCAATGGC CCTGCTCGGC AGGAATAAGC ACTACCAGGT GCATAAAATC
GAGCGGCGGC ACTTCAACAG CACGGCCAGG AAGGTCGGCT ATGGCGACAA CGCGGAGCCG
CTCGTGCAGG AGATTATCGC CCGCACGCCC GAGGTCGTAG AGAAAGTCCG CGGCGAACTG
CCCGCGGGGT TCTCCGGGCA GGTGGCGGAC AAGGTTCTGG GTGGCATGCT GGCGGCGGCG
CGCGTGCTGG AGAACATGCC TCCAGACTGA
|
|---|
| Protein sequence | MGRRSHSQTL SLWANGDFVG RWTINANGES ELQYDRAWRE SARGRPISLS LPFNLHNEPL
KGDSVAHYFE GLLPDSETIR KRVAARFRTG SIGAFDLLAA IGRDCVGALQ LLPDEAVPEG
LDKVEGIVVD EEAIERHLLE VVSPDRFAAA RDPDDDFRIS LAGAQEKDAF LRWNGQWMKP
RGTTPTTHIF KLPIGMVGGR KADFTTSVDN EWLCLRLCKE YGLPTAEARI ETFGSQRVLV
VERFDRVLSR SGKQLFRLIQ EDFCQATGTS PLVKYENEGG PGLQQMFTLL QQSQQAVEDM
HTLMASQIIF WMMRAPDGHA KNFSIQLLAG GAGRFRLSPI YDVMSAYPVI GDGPSQWADQ
EIKLAMALLG RNKHYQVHKI ERRHFNSTAR KVGYGDNAEP LVQEIIARTP EVVEKVRGEL
PAGFSGQVAD KVLGGMLAAA RVLENMPPD
|
|---|
| |