| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1228 |
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| Symbol | |
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| ID | 4008283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2013537 |
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| End bp | 2014700 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637951458 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_554078 |
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| Protein GI | 91778870 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.208027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATTACTGC GACCGCCGTC TCCGCCACTT TTGCGTGCGC GGCGCACGCC
CAGAGCAGCG TCACGCTATA CGGCATTGTC GATGCCGGCC TGACGTACGT GAGCAATGAA
GTCAGCAAGG ATTCCACCGT AACGTCAGAC GGGCGTGTCA CCGGCGGCAA GGCCATGTTC
GGCATGACCG GCGGCAACAT CCAGCCGAGC CGCTGGGGCC TGCGCGGTGT CGAGGATCTG
GGTGGCGGAC TGAAAACGGT CTTCAACCTG GAAAGCGGGT TCAACATTGC GAACGGCAAT
CAGGCCGTGT CCAACAAGCT GTTCAACCGC CAGGCGTATG TCGGCCTGTC CAATGAGTAC
GGTACGGTTT CGTTCGGCCG CCAGTACGAC TCCGTGGTCG ACTATCTCGC GCCGCTGACA
GCGGCCGGCA GCTGGGGCGG CACGTATTTC GCGCATCCGG GCGACAACGA CAACGCCAAC
TCGTCGATCA GCGTCAACAA TTCGGTCAAG TTCCAGAGCG CGAACTACGC CGGCTTCTCA
ATGAGCGGCC TGTATGGCTT CTCGAACAAT GCGGGCTTCG CCGACAACCG CGCATACAGC
GTCGGCGCGG GTTACCGCAA TGGTGGCTTG CAACTGGGTG CGGCCTATCT CCAGTACCAG
GGCATGGACC TGAATCAGAG CAATGGCGCG GTCAGCGGCG GCACCTTCGC GGCATCCGCG
GTCAGCGGCG TTCAGAATCA GCGCACCTGG GGTCTCGGCG GCAGCTACGC GTTCGGTCCG
TTCATTCTCG GCACCGTCTT TACGCAGAGC CGCTTCCAGG ACAAGTTCTC GGATATCTCG
GTTCGCTACA ACAACTACGA GGTCAATGCG CGCTACAACC TGACGCCGGA ACTGGGTCTG
GGTGCGGCCT ACACGTATAC GCAGGCACTG CGCGCGGCGC CGGGCACCAG CGACACGAAC
ACCGGCGCGG CCCACTGGAA TCAGTTCGGA CTGCAGGCTG ACTACTCGCT GTCGAGGCGT
ACCGACATTT ACGCAGAAGC GGTCACGCAG CTCGGCGCGA ACAATGGTCG CGGGCTGAAT
GCGGTGCAAA TCAACGGTAC CTCCGCACCG TCCACGGCGA GCAACCAGTT TCTCGTGACG
ACGGGCATCC GTCACCGGTT CTGA
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| Protein sequence | MKKIITATAV SATFACAAHA QSSVTLYGIV DAGLTYVSNE VSKDSTVTSD GRVTGGKAMF
GMTGGNIQPS RWGLRGVEDL GGGLKTVFNL ESGFNIANGN QAVSNKLFNR QAYVGLSNEY
GTVSFGRQYD SVVDYLAPLT AAGSWGGTYF AHPGDNDNAN SSISVNNSVK FQSANYAGFS
MSGLYGFSNN AGFADNRAYS VGAGYRNGGL QLGAAYLQYQ GMDLNQSNGA VSGGTFAASA
VSGVQNQRTW GLGGSYAFGP FILGTVFTQS RFQDKFSDIS VRYNNYEVNA RYNLTPELGL
GAAYTYTQAL RAAPGTSDTN TGAAHWNQFG LQADYSLSRR TDIYAEAVTQ LGANNGRGLN
AVQINGTSAP STASNQFLVT TGIRHRF
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