| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1075 |
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| Symbol | |
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| ID | 4008436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2183088 |
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| End bp | 2185151 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637951610 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_554230 |
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| Protein GI | 91779022 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.990194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0882884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCC GCGGCATCGA GCGGAGGGCA ACGTACCCGC CGTGTCCGTT TCACCGGAGA
CATGCCTTGA CCCAACGTTC TGCCAACCCG CCCGCCGTCG GTCGGCCCGA TGTCATCGCG
CAGGCTCACG CCCGCTCGCT CGAGCTCGGT CTGCGCGCGT CGGAAATGCC GGACTTTCAT
CCGCTGCGCC GGCCCGCGCT GCGTGAGCTC GTCGATCGCA ATCAGTCGCT TTATACGCAC
GCGCTTCCGG TCATGGAAAC GCTGCATGCG CAGATCGTCG ATACGCAAAG CATGGTGCTG
CTCACCGACA ATCACGGCGT GATCCTGCAC AGTCTCGGCG ACAGCGACTT CGTCGAAAAA
GCCAATCGCG TCGCGCTGTG TCCGGGCGTT TCGTGGGCCG AGGCGGATCG CGGCACCAAC
GCGATCGGCA CCGCGCTCGT GGACGGGCAG CCGACCGTCG TGCACGCGGG TGAACACTTC
CTGCACGCCA ACCGTATTCT CACCTGCTCG TGCGCGCCGA TTGCGGATCC GTTCGGGCGC
ACCATCGGCG CGCTCGACGT GAGCGGCGAT ACGCGCGGCT TTCACAAGCA CACGCTCGCG
CTCGTCAGAA TGTCAGCGCA GATGATCGAA AATCATCTGT TCTCCAATCA ATTCGTCGAT
GCGATTCGCG TTCACTTTCA CGCGCGCGCG GAGTTCATCG GCACGCTGTT CGAAGGGCTC
GCGGCATTCG CGCCGGACGG CACGTTTCTG TCGGCCAACC GCAGCGCGCT GTTTCAATTC
GGGCAGCCGC TGGCCGAACT GCAACGGCAA CCCTTCGATG CACTGTTCGG GATCGCCTTC
TCCAGGGTGT TGCAGCAGAT CACGCGCGCG CCCGGCGAAA CCATTCTGCT GACGCTGCCA
AGCGGCGTGC GCGTGGTGGC GCGCGGCGAA CACACCGCGC CCCGATATGT CGGACCGGCC
GAAAGCCTCG ACACCTCGCG CGCACCGCTC CCGGGCGGGG CGCGTCAAAC GCCGCGCCCC
GCCGAGCCTG CGCCGCTCGC CACGCTTGAA ACGCTCGACA CCGGCGACGC GCAGGTCGCC
GCGATCCTGC GGCGTGTCGC CAAACTGCGC GGCCGCGATA TTCCGATTCT CGTGCTCGGC
AAGACGGGCA CCGGCAAGGA GTGGCTCGCG CGCGCCATCC ATCACGATTC GCCGCGACGG
GCCGCGCCTT TCGTCGCGCT GAATTGCGCG TCGTTGCCCG ATACGCTGAT CGAAGCGGAG
TTGTTCGGTT ACGAAGACGG CGCGTTCACC GGCGCGAAAA AGCGCGGCAG CGTCGGCAAG
ATCGTGCAGG CCGACGGCGG CACGCTGTTC CTCGACGAAA TCGGCGACAT GCCACTCGCC
CAGCAGGTGC GTTTGATGCG CGTTCTGCAG GAGCGCACCG TCGTGCCGCT CGGCGCAACC
CGGGCGATTC CGGTGGATCT GCGCATTGTC TGCGCGACCC ACCGCAACCT GCGCGCGATG
ATCGAAGACG GCACCTTCCG CGAAGACCTC TATTACCGGA TCAATGGACT CGTGGTGACG
CTGCCTGCGC TGCGCGAGCG TACCGATCTG CATGCGCTCG TCACGCGCAT GCTGGCCTTG
CAGCCCGACG GCGAGCGGCT GCCGCGCCGC GTGTCGGCCG AGGTGCTCGA ACGATTTGCG
CAATGCCGCT GGCCGGGCAA TCTGCGGCAA CTGGCCAACG TGTTGCGCAC CGCGAGCATC
ATGGCCGAAG GTGCGCAGCA GATCGAACTC GACGATCTGC CCGACGACTT TCTGCAGGAT
TGCGTCGACG CGGCGGCGGA GCAAAGCGTG CAATCACCGC TGGCGCGTGC GGGTTCAGGC
GTGGACGACG AGGCCCGCGC CGCTGCGCAA ACCCAGGGGC AAGGTCAACA ACCGCCGTCC
GGCAAGATGG AAGCGTGGCA GGCCTCGCTG ATTGCGCAGA CGCTCGAGCG ACTCGACGGC
AATGTGTCGG CGGCGGCGCG CGAGCTGGGA TTGGCGCGCA ATACGGTGTA CCGCTATTTG
CGACGCGGCG GCACGACGCA TTGA
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| Protein sequence | MLRRGIERRA TYPPCPFHRR HALTQRSANP PAVGRPDVIA QAHARSLELG LRASEMPDFH
PLRRPALREL VDRNQSLYTH ALPVMETLHA QIVDTQSMVL LTDNHGVILH SLGDSDFVEK
ANRVALCPGV SWAEADRGTN AIGTALVDGQ PTVVHAGEHF LHANRILTCS CAPIADPFGR
TIGALDVSGD TRGFHKHTLA LVRMSAQMIE NHLFSNQFVD AIRVHFHARA EFIGTLFEGL
AAFAPDGTFL SANRSALFQF GQPLAELQRQ PFDALFGIAF SRVLQQITRA PGETILLTLP
SGVRVVARGE HTAPRYVGPA ESLDTSRAPL PGGARQTPRP AEPAPLATLE TLDTGDAQVA
AILRRVAKLR GRDIPILVLG KTGTGKEWLA RAIHHDSPRR AAPFVALNCA SLPDTLIEAE
LFGYEDGAFT GAKKRGSVGK IVQADGGTLF LDEIGDMPLA QQVRLMRVLQ ERTVVPLGAT
RAIPVDLRIV CATHRNLRAM IEDGTFREDL YYRINGLVVT LPALRERTDL HALVTRMLAL
QPDGERLPRR VSAEVLERFA QCRWPGNLRQ LANVLRTASI MAEGAQQIEL DDLPDDFLQD
CVDAAAEQSV QSPLARAGSG VDDEARAAAQ TQGQGQQPPS GKMEAWQASL IAQTLERLDG
NVSAAARELG LARNTVYRYL RRGGTTH
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