Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0920 |
Symbol | |
ID | 4008591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2347842 |
End bp | 2349305 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637951764 |
Product | major facilitator superfamily transporter metabolite/H(+) symporter |
Protein accession | YP_554384 |
Protein GI | 91779176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.697574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCC CAGATCATGC CGGCTCCGTC GCGAACAGTA GCGGCGCGGT ATATTCGGAT ACGGCGGCGA CTAGTGCGCG CGCGGCCACG CCGCTCGACG CCGGCAGCAT CTCCGCCCGC CTCGACCGGC TGCCCGCCAC GCGCTCCATC TGGAAACTGG TGGTACTGCT GAGCCTCGGC TTCTTCTTCG AACTCTACGA TCTGCTGTAC TCGGGCTATG TCGCGCCCGG CCTCGTCAAA AGCGGTTTGC TGACCGCGAC CACGCATGGC CTGTTCGGCT CGACCGGCGT CGCGAGTTTC ATTGCCGCGC TGTTCAGCGG CCTCTTTATC GGCACGATCG CGTGCGGCTT TCTGGCGGAT CGCTTCGGAC GCCGTGCGGT GTTCACCTAC TCGCTGCTCT GGTACACCGC GGCCAACATC GTGATGGCGT TTCAGGAAAC GGCTACCGGG CTGAACTTCT GGCGCTTCCT GGCCGGGATC GGCATTGGCG TCGAACTGGT GACGATCGGC ACGTACATTT CGGAGCTGGT GCCCAAGCAG ATTCGCGGCC GCGCATTCGC GTGCGAACAG GCAGTCGGTT TTACGGCGGT GCCGGTGGTG GCATTTCTCT CGTATCTATT GGTGCCGCGT ACGCTGCTCG GCCTCGACGG CTGGCGCTGG GTCGTGCTGA TCGGCGCACA CGGTGCGCTG TTCGTGTGGT GGATTCGCCG CGCATTGCCG GAAAGCCCGC GTTGGCTCGC ACAACAAGGA CGTCTTGCCG AAGCCGATCG GGTGATGACC GAACTCGAAG CAAAGGTGCG CCGCGAGTAC GGCCGCGAAC TGCCGCCGCC CGCGCCGCCG GTGCCGGTCG CGCCGCGCGG CAGCTTCCGC GATATGTGGG TGCCGCCATA CCGCAGCCGC ACGCTGATGA TGACGATCTT CAATATCTTC CAGACGGTGG GCTTCTACGG CTTTGCGAAT TGGGTGCCCA CGCTTCTGAT CAAGCAGGGC ATTACGATCA CCACGAGCCT GATGTATTCG AGCGTGATCG CGCTGGCTGC ACCGCTCGGT CCGGTGATCG GGCTTTTTAT CGGCGACCGC TTCGAGCGCA AGACGGTGAT CGTGGTGATG GCGGGTGTGA ATATCGTCTG CGGGCTGTGG TTCAGTCAGG CGGCGGGTGC TGTGTTGCTG GTGAGTCTCG GCGTGGGTCT GACGCTCGCG GGCAACATCA TTTCGTACAG CTTTCACGCG TATCAGGCCG AGCTTTTTCC GACCAGCATT CGTGCACGCG CAGTGGGCTT CGTTTATTCG TGGAGCCGGT TTTCCGCGAT TTTTACCGCT TTTCTGATCG CCGCCGTGTT GAAGCACTTT GGCACTGGCG GCGTGTTCGT GTTCATCGCC GGTGCGATGT TGATCGTGAT GCTCGCGATT GGTTTGATGG GGCCACGCAC CAACGGAATC GAACTGGAGA AGATTTCGAA GTAG
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Protein sequence | MASPDHAGSV ANSSGAVYSD TAATSARAAT PLDAGSISAR LDRLPATRSI WKLVVLLSLG FFFELYDLLY SGYVAPGLVK SGLLTATTHG LFGSTGVASF IAALFSGLFI GTIACGFLAD RFGRRAVFTY SLLWYTAANI VMAFQETATG LNFWRFLAGI GIGVELVTIG TYISELVPKQ IRGRAFACEQ AVGFTAVPVV AFLSYLLVPR TLLGLDGWRW VVLIGAHGAL FVWWIRRALP ESPRWLAQQG RLAEADRVMT ELEAKVRREY GRELPPPAPP VPVAPRGSFR DMWVPPYRSR TLMMTIFNIF QTVGFYGFAN WVPTLLIKQG ITITTSLMYS SVIALAAPLG PVIGLFIGDR FERKTVIVVM AGVNIVCGLW FSQAAGAVLL VSLGVGLTLA GNIISYSFHA YQAELFPTSI RARAVGFVYS WSRFSAIFTA FLIAAVLKHF GTGGVFVFIA GAMLIVMLAI GLMGPRTNGI ELEKISK
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