Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0716 |
Symbol | |
ID | 4008795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2573169 |
End bp | 2573846 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637951968 |
Product | putative pyrimidine reductase |
Protein accession | YP_554588 |
Protein GI | 91779380 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.456218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCT ATATCGTCGC TCACATGATG TCCTCGCTCG ACGGCCGCAG TCTGACTGAC GGCTGGCACC TCGACTATGC GTCGGACCTG TACGAAACCA CCGCCGCCAC CTTCGAAGCC GACGGCTGGA TCTGCGGACG GGTGACCATG CAGGAGATTT CGCACGGCAA GGACTATCCG GCAGGGCTCG CCAGTGGCGC GGTGCCTCGC ACCGATCATT TCGTCGAGCG CAACGCGGAT CAATATGCGA TTTCGATCGA TCCGCAAGGG CGCGTGGCAT GGAAGAGCAA CACGGCGCTC AAATCGCACG TAATCGAAGT ACTGACCGAG CAGGTTGCCG ACGATTACCT CGCTTACCTG CAATCGATTG GTGTGTCATA CGTGTTCGGC GGCAAGACCG GAATCGATCT CGACAAGGTA GTGCAAACGC TGGCGCGCGA ACTCGGCGTG AAGAAGCTGA TCGTGGAGGG CGGCTCGCAC GTGAGCGGCG CGTTCGTCAA CGCCGGCCTC GTGGACGAAG TGAGCGTGCT GATCCTGCCG CTGGTGGACG GCCGCAGTGA ACACCCTTCC TCGTTCGAAG TGGCGATGGA GAAGTGGCAA GCGCCGGCGT ATCTGAAGCT CACGTCCGTT GAAAAAACGG ACCACGATGC AGTGTGGCTG CGCTATACGA AGGCTTGA
|
Protein sequence | MKPYIVAHMM SSLDGRSLTD GWHLDYASDL YETTAATFEA DGWICGRVTM QEISHGKDYP AGLASGAVPR TDHFVERNAD QYAISIDPQG RVAWKSNTAL KSHVIEVLTE QVADDYLAYL QSIGVSYVFG GKTGIDLDKV VQTLARELGV KKLIVEGGSH VSGAFVNAGL VDEVSVLILP LVDGRSEHPS SFEVAMEKWQ APAYLKLTSV EKTDHDAVWL RYTKA
|
| |