Gene Bxe_B0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0716 
Symbol 
ID4008795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2573169 
End bp2573846 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID637951968 
Productputative pyrimidine reductase 
Protein accessionYP_554588 
Protein GI91779380 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.456218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCT ATATCGTCGC TCACATGATG TCCTCGCTCG ACGGCCGCAG TCTGACTGAC 
GGCTGGCACC TCGACTATGC GTCGGACCTG TACGAAACCA CCGCCGCCAC CTTCGAAGCC
GACGGCTGGA TCTGCGGACG GGTGACCATG CAGGAGATTT CGCACGGCAA GGACTATCCG
GCAGGGCTCG CCAGTGGCGC GGTGCCTCGC ACCGATCATT TCGTCGAGCG CAACGCGGAT
CAATATGCGA TTTCGATCGA TCCGCAAGGG CGCGTGGCAT GGAAGAGCAA CACGGCGCTC
AAATCGCACG TAATCGAAGT ACTGACCGAG CAGGTTGCCG ACGATTACCT CGCTTACCTG
CAATCGATTG GTGTGTCATA CGTGTTCGGC GGCAAGACCG GAATCGATCT CGACAAGGTA
GTGCAAACGC TGGCGCGCGA ACTCGGCGTG AAGAAGCTGA TCGTGGAGGG CGGCTCGCAC
GTGAGCGGCG CGTTCGTCAA CGCCGGCCTC GTGGACGAAG TGAGCGTGCT GATCCTGCCG
CTGGTGGACG GCCGCAGTGA ACACCCTTCC TCGTTCGAAG TGGCGATGGA GAAGTGGCAA
GCGCCGGCGT ATCTGAAGCT CACGTCCGTT GAAAAAACGG ACCACGATGC AGTGTGGCTG
CGCTATACGA AGGCTTGA
 
Protein sequence
MKPYIVAHMM SSLDGRSLTD GWHLDYASDL YETTAATFEA DGWICGRVTM QEISHGKDYP 
AGLASGAVPR TDHFVERNAD QYAISIDPQG RVAWKSNTAL KSHVIEVLTE QVADDYLAYL
QSIGVSYVFG GKTGIDLDKV VQTLARELGV KKLIVEGGSH VSGAFVNAGL VDEVSVLILP
LVDGRSEHPS SFEVAMEKWQ APAYLKLTSV EKTDHDAVWL RYTKA