Gene Bxe_B0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0196 
Symbol 
ID4009315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3148637 
End bp3149701 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content68% 
IMG OID637952477 
ProductDMT family permease 
Protein accessionYP_555097 
Protein GI91779889 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC GCTTCAACGC AGCGTTTACC GCCCTGCTCG CCGCCGCCCT GTTCGGCGCG 
ACCACGCCGC TCGCCAAGGC GCTGCTCGGC TCGCTCTCGC CGTTCCTGCT TGCCGGGCTG
TTCTATCTCG GCAGCGGCGG CGGCCTCGGC GCCCTGATTC TGGCTCGCCG GCTGAAACGC
ACAGGCGCCG GGCAACCAGC CGGCCATAGC CGCTTCCCGC TACACGATGT GCCGTGGCTG
GCCGGCGCGA TCGTGGCTGG CGGCGTCGCG GGTCCCGCTT TGTTGATGCT GGGCTTGAAA
ACGACGCCGG CCACCACCGG CTCCTTGCTG CTCAATCTGG AAGGCGTGTT CACCGCGCTG
ATCGCATGGA TCGTGTTTCG CGAGAACGTC GACACGCAGG TGTTCCTCGG CATGGCCGCA
ATCGTCGCGG GCGGCGTGGC GCTGTCCTGG CAGCCGGGCG CGGCGGGGCT GCCGCCCGGC
ACATTGCTGC TGGCCGGCGC ATGCGCGTGC TGGGCCGTCG ACAACAACCT CACGCGCAAG
GTGTCGGCGC ACGACGCTAT GTTTATCGCC TGCATAAAGG GGCTCGTAGC GGGTTTGGTC
AACGTGGCGC TCGCGCTCAC GCTCGGCGCC GCATGGCCCA GGGTCTCGAT CACGATGCTT
GCCATGCTCA CGGGCTTTGC GGGCTACGGC GTCAGTCTCG TGCTGTTCGT CGTCGCGCTG
CGCCATCTTG GCACCGCGCG AACCGGCGCC TACTTCTCGG TCGCTCCGCT ATTCGGCGTG
ACCTTGTCCT GGCTGCTCTG GCCGGAGCTG CCGCCGCCGT TGTTCTGGAT CGCCGCCGCG
CTGATGACGC TGGGTGTGTG GCTGCACATT CGCGAGCGTC ATGAGCATCA ACACGCGCAC
GATGCGCTCG ACCACACGCA CCGTCACCGG CACGACGCGC ATCATCAGCA CGAGCACGAT
TTTGCGTGGG ACGGCGCCGA GCCGCACACG CATCCGCACC GTCATGCACC AATAACGCAC
GCGCACGCGC ATTTCCCCGA TATTCACCAC CGGCATACGC ATTGA
 
Protein sequence
MPTRFNAAFT ALLAAALFGA TTPLAKALLG SLSPFLLAGL FYLGSGGGLG ALILARRLKR 
TGAGQPAGHS RFPLHDVPWL AGAIVAGGVA GPALLMLGLK TTPATTGSLL LNLEGVFTAL
IAWIVFRENV DTQVFLGMAA IVAGGVALSW QPGAAGLPPG TLLLAGACAC WAVDNNLTRK
VSAHDAMFIA CIKGLVAGLV NVALALTLGA AWPRVSITML AMLTGFAGYG VSLVLFVVAL
RHLGTARTGA YFSVAPLFGV TLSWLLWPEL PPPLFWIAAA LMTLGVWLHI RERHEHQHAH
DALDHTHRHR HDAHHQHEHD FAWDGAEPHT HPHRHAPITH AHAHFPDIHH RHTH