Gene Bxe_B0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0040 
Symbol 
ID4009471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3316870 
End bp3318105 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content59% 
IMG OID637952616 
Productmajor facilitator transporter 
Protein accessionYP_555236 
Protein GI91780028 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT CAAGACTTTT CATGGCCAGT TGCATTTCGA TGCTGACTAC TGCGCTGGTC 
TTCGCCATTC GCGGCGACAT CGAAGCCCCC CTGCGTGCAG CATTTCATTT GAGTGGCGAG
CAGATGGGCC TGATCTGGGG GCCGGCGTTC TTCGGCTTCA CGGCGTCGAT CTTCCTCAGC
AGCTTTGTGA TTGACCTGAT CGGCATGAGA CGGCTTTATC TGCTGTCGGG ATTCGGCTTC
CTCGCAAGCC TCGTCATCAT CGTTCTAGCG CCTTACCCGG TCGTACACGC TGATTCGATC
TTCGCGCACC TCGGGACGAC GATGCTCTAC GTGGGTTTCC TCGTGATGGG CCTGAGTCAG
GGGCTCGTCG AGGGCGTGGT GAATCCATTG GTCTCGTCGA TCTATAACGA CCAGAAGACC
ACGCGCCTGA ACGCGTTGCA CGCATGGTGG CCTGCCGGCA TGATCGTCGG TGGTCTCGCG
GCGTTGGGGC TCACCCAGTT CCACGCGATA TGGCAGGTCA AGCTCGCGGT CGTCGCAGTG
CCAACGCTGA CTTACATGGC CATGTCATGG AACCAGAGTT TTCCGCCGAC CGAACGCGCC
GCTAGCGAAG TACCTACGAA CGAGATGTTG CGCGAGACGG TCAATCCCCT GTTTCTGGTG
CTGTTCTGTT TCATGTGGCT CACTGCAATC ACCGAACTCG GCGCCGATCA ATGGTTTCCA
TCAATGATGA AACAGTTGAC CGGTCTCGAT GGCATTCTCT TTCTGGTGTA TACGGCGGGG
CTAGTGTTCA CTATGCGCAC TGCGGTGGGT CGCTATGTGC ACCGGTCGCC GTTCTTTGCA
CTCACGCTAT GCAGCGCGCT GTGCGCGGCG GGCCTATGGA TGCTGGGCTC ACTCCATCCA
GGCGACTCGG TATTGGCTGC GTTCGCTGCA GCGACGCTGT TCGGAGTCGG CAAATCGCTG
TTCTGGCCGA CCATGTTGGG CATTACCTCG GAGCGGTTCC CACGAGGTGG CCCGCTTTGT
CTCGGATTGA TGGGCGGCGG CGGATTCTTG TCGATTGCGG TCGCATTGCC GATCATTGGG
CGCAACCTTG ATCAACTCGG GCCCAATGGA GCGATCAGGG CACTCGCGGT GTTGCCTGCG
GCGCTGGTGA TCGGCTTCAT GGCGATCTAT ATGCTGTTCA AACTCCGGGG CGGATATACG
GCGATCCTGC TGAGACCTGT CGAGGCCCAA GACTGA
 
Protein sequence
MNRSRLFMAS CISMLTTALV FAIRGDIEAP LRAAFHLSGE QMGLIWGPAF FGFTASIFLS 
SFVIDLIGMR RLYLLSGFGF LASLVIIVLA PYPVVHADSI FAHLGTTMLY VGFLVMGLSQ
GLVEGVVNPL VSSIYNDQKT TRLNALHAWW PAGMIVGGLA ALGLTQFHAI WQVKLAVVAV
PTLTYMAMSW NQSFPPTERA ASEVPTNEML RETVNPLFLV LFCFMWLTAI TELGADQWFP
SMMKQLTGLD GILFLVYTAG LVFTMRTAVG RYVHRSPFFA LTLCSALCAA GLWMLGSLHP
GDSVLAAFAA ATLFGVGKSL FWPTMLGITS ERFPRGGPLC LGLMGGGGFL SIAVALPIIG
RNLDQLGPNG AIRALAVLPA ALVIGFMAIY MLFKLRGGYT AILLRPVEAQ D